Miyakogusa Predicted Gene
- Lj0g3v0068489.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0068489.2 Non Chatacterized Hit- tr|I1LXY1|I1LXY1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3920 PE=,94.44,0,no
description,NULL; Meth_synt_2,Methionine synthase, vitamin-B12
independent; 5-METHYLTETRAHYDROPTE,CUFF.3256.2
(783 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65903 similar to UniRef100_A7QRI6 Cluster: Chromosome... 1346 0.0
gnl|LJGI|TC70396 homologue to UniRef100_Q71EW8 Cluster: Methioni... 295 2e-79
gnl|LJGI|TC71209 homologue to UniRef100_Q71EW8 Cluster: Methioni... 258 5e-68
gnl|LJGI|TC76652 homologue to UniRef100_Q71EW8 Cluster: Methioni... 206 2e-52
gnl|LJGI|TC82579 homologue to UniRef100_Q71EW8 Cluster: Methioni... 178 3e-44
gnl|LJGI|TC81903 homologue to UniRef100_Q71EW8 Cluster: Methioni... 113 2e-24
gnl|LJGI|DC599664 homologue to UniRef100_Q71EW8 Cluster: Methion... 96 4e-19
gnl|LJGI|TC78694 homologue to UniRef100_Q4H1G2 Cluster: Methioni... 78 9e-14
gnl|LJGI|AV415311 UniRef100_Q71EW8 Cluster: Methionine synthase;... 62 5e-09
>gnl|LJGI|TC65903 similar to UniRef100_A7QRI6 Cluster: Chromosome chr8 scaffold_150,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_150, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 1822
Score = 1346 bits (679), Expect = 0.0
Identities = 679/679 (100%)
Strand = Plus / Plus
Query: 105 cttctggtcttcaacagctcaaagtctgaccaaacgacctatgaagggaatgcttactgg 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 cttctggtcttcaacagctcaaagtctgaccaaacgacctatgaagggaatgcttactgg 836
Query: 165 gcctgttactattctgaactggtcctttgtgagagatgaccagcctcgatttgaaacctg 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gcctgttactattctgaactggtcctttgtgagagatgaccagcctcgatttgaaacctg 896
Query: 225 ctaccagattgctttggctatcaaggatgaggttgaggatcttgagaaagctggtatctc 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 ctaccagattgctttggctatcaaggatgaggttgaggatcttgagaaagctggtatctc 956
Query: 285 tgtcatccagattgatgaggctgctctgagagaaggtttgcctctaaggaagtcagagga 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 tgtcatccagattgatgaggctgctctgagagaaggtttgcctctaaggaagtcagagga 1016
Query: 345 ggctttctatctaaactgggcagttcactcatttaggattaccaactgtggtgtgaatga 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 ggctttctatctaaactgggcagttcactcatttaggattaccaactgtggtgtgaatga 1076
Query: 405 cactacccagattcacactcacatgtgctactcaaatttcaatgacattattcactcaat 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 cactacccagattcacactcacatgtgctactcaaatttcaatgacattattcactcaat 1136
Query: 465 catagatatggatgctgatgtgatcactattgagaactcgagatcagatgagaagctact 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 catagatatggatgctgatgtgatcactattgagaactcgagatcagatgagaagctact 1196
Query: 525 gtcagtcttccgcgagggagttaagtatggtgctggcattggtcctggggtttacgatat 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 gtcagtcttccgcgagggagttaagtatggtgctggcattggtcctggggtttacgatat 1256
Query: 585 tcactcacctagaatcccgcccacagaagaaattgctgacagaatcaacaagatgcttgc 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 tcactcacctagaatcccgcccacagaagaaattgctgacagaatcaacaagatgcttgc 1316
Query: 645 agttcttgaaagcaacattctttgggtaaacccggattgcggcctcaagacgcgcaaata 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1317 agttcttgaaagcaacattctttgggtaaacccggattgcggcctcaagacgcgcaaata 1376
Query: 705 caccgaggttaaggctgctctcaccaacatggttgccgctgccaaacttattcgcaacca 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 caccgaggttaaggctgctctcaccaacatggttgccgctgccaaacttattcgcaacca 1436
Query: 765 gcttgctagtgccaagtga 783
|||||||||||||||||||
Sbjct: 1437 gcttgctagtgccaagtga 1455
Score = 206 bits (104), Expect = 2e-52
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 1 atggttgagtactttggagaacaattatctggctttgctttcactgccaatgggtgggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 atggttgagtactttggagaacaattatctggctttgctttcactgccaatgggtgggtg 702
Query: 61 caatcatatggatcccgctgtgtcaaaccacctatcatctatgg 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 caatcatatggatcccgctgtgtcaaaccacctatcatctatgg 746
>gnl|LJGI|TC70396 homologue to UniRef100_Q71EW8 Cluster: Methionine synthase; n=2;
Papilionoideae|Rep: Methionine synthase - Glycine max
(Soybean), partial (26%)
Length = 864
Score = 295 bits (149), Expect = 2e-79
Identities = 461/565 (81%)
Strand = Plus / Plus
Query: 176 ttctgaactggtcctttgtgagagatgaccagcctcgatttgaaacctgctaccagattg 235
|||| |||||||| ||||| ||| ||||||||||| | | ||| ||| ||| |||||||
Sbjct: 2 ttctcaactggtcttttgttagaaatgaccagcctaggtctgagaccacctatcagattg 61
Query: 236 ctttggctatcaaggatgaggttgaggatcttgagaaagctggtatctctgtcatccaga 295
||||||| || ||||| ||||| ||||| |||||||| | ||| || ||| |||||||
Sbjct: 62 ctttggccattaaggacgaggtagaggaccttgagaagggtggcattaatgttatccaga 121
Query: 296 ttgatgaggctgctctgagagaaggtttgcctctaaggaagtcagaggaggctttctatc 355
||||||||||||| ||||||| || | || ||||||||||||||| | ||| |||
Sbjct: 122 ttgatgaggctgcattgagagaggggctcccactaaggaagtcagagcaagctcactact 181
Query: 356 taaactgggcagttcactcatttaggattaccaactgtggtgtgaatgacactacccaga 415
| ||||||| |||||||| || || || ||||| |||||| | ||||| || ||||
Sbjct: 182 tggactgggctgttcactccttcagaatcaccaatgttggtgttcaggacaccactcaga 241
Query: 416 ttcacactcacatgtgctactcaaatttcaatgacattattcactcaatcatagatatgg 475
| |||||||||||||||||||| || ||||| ||||| || ||||| ||||| |||||||
Sbjct: 242 tccacactcacatgtgctactccaacttcaacgacatcatccactccatcattgatatgg 301
Query: 476 atgctgatgtgatcactattgagaactcgagatcagatgagaagctactgtcagtcttcc 535
|||||||||| ||||| ||||||||||| | || || |||||||| |||||||| ||||
Sbjct: 302 atgctgatgttatcaccattgagaactctcgctccgacgagaagcttctgtcagtgttcc 361
Query: 536 gcgagggagttaagtatggtgctggcattggtcctggggtttacgatattcactcaccta 595
| || ||||| |||||||||||||| ||||| ||||| || ||||| || ||||| || |
Sbjct: 362 gtgaaggagtgaagtatggtgctggaattggccctggtgtctacgacatccactccccaa 421
Query: 596 gaatcccgcccacagaagaaattgctgacagaatcaacaagatgcttgcagttcttgaaa 655
||||||| || || || |||||||||||||| |||||||||||||||||||| ||||| |
Sbjct: 422 gaatcccacctactgatgaaattgctgacaggatcaacaagatgcttgcagtgcttgaga 481
Query: 656 gcaacattctttgggtaaacccggattgcggcctcaagacgcgcaaatacaccgaggtta 715
||| | | ||||| ||||| || || || |||||||| || || ||||||||||| |
Sbjct: 482 agaacgtcttgtgggtgaaccctgactgtggtctcaagacccgtaagtacaccgaggtga 541
Query: 716 aggctgctctcaccaacatggttgc 740
|| | || |||||||||||||||||
Sbjct: 542 agccagccctcaccaacatggttgc 566
>gnl|LJGI|TC71209 homologue to UniRef100_Q71EW8 Cluster: Methionine synthase; n=2;
Papilionoideae|Rep: Methionine synthase - Glycine max
(Soybean), partial (20%)
Length = 782
Score = 258 bits (130), Expect = 5e-68
Identities = 316/378 (83%)
Strand = Plus / Plus
Query: 406 actacccagattcacactcacatgtgctactcaaatttcaatgacattattcactcaatc 465
||||| ||||| ||||| |||||||||||||| || ||||||||||| || ||||| |||
Sbjct: 88 actactcagatccacacccacatgtgctactctaacttcaatgacatcatccactctatc 147
Query: 466 atagatatggatgctgatgtgatcactattgagaactcgagatcagatgagaagctactg 525
|| ||||||||||||||||||||||| ||||||||||| | || ||||||||||| |||
Sbjct: 148 atcgatatggatgctgatgtgatcaccattgagaactcacgttcggatgagaagcttctg 207
Query: 526 tcagtcttccgcgagggagttaagtatggtgctggcattggtcctggggtttacgatatt 585
|| || ||||| || ||||||||||| || ||||| ||||| ||||| || || ||||||
Sbjct: 208 tcggtgttccgtgaaggagttaagtacggagctggaattggccctggagtctatgatatt 267
Query: 586 cactcacctagaatcccgcccacagaagaaattgctgacagaatcaacaagatgcttgca 645
||||| || ||||| || || || |||||||| || ||||| ||||||||||||||||||
Sbjct: 268 cactcccccagaataccaccaactgaagaaatcgcagacaggatcaacaagatgcttgca 327
Query: 646 gttcttgaaagcaacattctttgggtaaacccggattgcggcctcaagacgcgcaaatac 705
|| ||||| | |||||| | ||||||||||| ||||| || |||||||| ||||| |||
Sbjct: 328 gtgcttgagacaaacattttgtgggtaaaccctgattgtgggctcaagactcgcaagtac 387
Query: 706 accgaggttaaggctgctctcaccaacatggttgccgctgccaaacttattcgcaaccag 765
|| ||||| || | || ||||| ||||||||||| || | || || || |||||||||
Sbjct: 388 acggaggtgaatccagccctcacaaacatggttgctgccacaaagctgatccgcaaccag 447
Query: 766 cttgctagtgccaagtga 783
||||| |||| |||||||
Sbjct: 448 cttgcaagtggcaagtga 465
>gnl|LJGI|TC76652 homologue to UniRef100_Q71EW8 Cluster: Methionine synthase; n=2;
Papilionoideae|Rep: Methionine synthase - Glycine max
(Soybean), partial (90%)
Length = 2230
Score = 206 bits (104), Expect = 2e-52
Identities = 320/392 (81%)
Strand = Plus / Plus
Query: 145 atgaagggaatgcttactgggcctgttactattctgaactggtcctttgtgagagatgac 204
||||||||||||||||| || ||||| || ||||| |||||||| ||||| ||| |||||
Sbjct: 1836 atgaagggaatgcttaccggccctgtcaccattctcaactggtcttttgttagaaatgac 1895
Query: 205 cagcctcgatttgaaacctgctaccagattgctttggctatcaaggatgaggttgaggat 264
|||||| | | ||| ||| ||| |||||||||||||| || ||||| ||||| |||||
Sbjct: 1896 cagcctaggtctgagaccacctatcagattgctttggccattaaggacgaggtagaggac 1955
Query: 265 cttgagaaagctggtatctctgtcatccagattgatgaggctgctctgagagaaggtttg 324
|||||||| | ||| || ||| |||||||||||||||||||| ||||||| || |
Sbjct: 1956 cttgagaagggtggcattaatgttatccagattgatgaggctgcattgagagaggggctc 2015
Query: 325 cctctaaggaagtcagaggaggctttctatctaaactgggcagttcactcatttaggatt 384
|| ||||||||||||||| | ||| ||| | ||||||| |||||||| || || ||
Sbjct: 2016 ccactaaggaagtcagagcaagctcactacttggactgggctgttcactccttcagaatc 2075
Query: 385 accaactgtggtgtgaatgacactacccagattcacactcacatgtgctactcaaatttc 444
||||| |||||| | ||||| || ||||| |||||||||||||||||||| || |||
Sbjct: 2076 accaatgttggtgttcaggacaccactcagatccacactcacatgtgctactccaacttc 2135
Query: 445 aatgacattattcactcaatcatagatatggatgctgatgtgatcactattgagaactcg 504
|| ||||| || ||||| ||||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 2136 aacgacatcatccactccatcattgatatggatgctgatgttatcaccattgagaactct 2195
Query: 505 agatcagatgagaagctactgtcagtcttccg 536
| || || |||||||| |||||||| |||||
Sbjct: 2196 cgctccgacgagaagcttctgtcagtgttccg 2227
Score = 73.8 bits (37), Expect = 1e-12
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 1 atggttgagtactttggagaacaattatctggctttgctttcactgccaatgggtgggtg 60
||||||||||||||||| || || || || |||||||| || || | ||||||||||||
Sbjct: 1662 atggttgagtactttggcgagcagttgtcaggctttgcctttacagttaatgggtgggtg 1721
Query: 61 caatcatatggatcccgctgtgtcaaaccacctatcatcta 101
||||| |||||||| || ||||| || ||||| ||||||||
Sbjct: 1722 caatcctatggatctcgttgtgtgaagccaccaatcatcta 1762
>gnl|LJGI|TC82579 homologue to UniRef100_Q71EW8 Cluster: Methionine synthase; n=2;
Papilionoideae|Rep: Methionine synthase - Glycine max
(Soybean), partial (15%)
Length = 986
Score = 178 bits (90), Expect = 3e-44
Identities = 258/314 (82%)
Strand = Plus / Plus
Query: 289 atccagattgatgaggctgctctgagagaaggtttgcctctaaggaagtcagaggaggct 348
|||||||||||||||||||| ||||||| || | || ||||||||||||||| | |||
Sbjct: 203 atccagattgatgaggctgcattgagagaggggctcccactaaggaagtcagagcaagct 262
Query: 349 ttctatctaaactgggcagttcactcatttaggattaccaactgtggtgtgaatgacact 408
||| | ||||||| |||||||| || || || ||||| |||||| | |||||
Sbjct: 263 cactacttggactgggctgttcactccttcagaatcaccaatgttggtgttcaggacacc 322
Query: 409 acccagattcacactcacatgtgctactcaaatttcaatgacattattcactcaatcata 468
|| ||||| |||||||||||||||||||| || ||||| ||||| || ||||| |||||
Sbjct: 323 actcagatccacactcacatgtgctactccaacttcaacgacatcatccactccatcatt 382
Query: 469 gatatggatgctgatgtgatcactattgagaactcgagatcagatgagaagctactgtca 528
||||||||||||||||| ||||| ||||||||||| | || || |||||||| ||||||
Sbjct: 383 gatatggatgctgatgttatcaccattgagaactctcgctccgacgagaagcttctgtca 442
Query: 529 gtcttccgcgagggagttaagtatggtgctggcattggtcctggggtttacgatattcac 588
|| ||||| || ||||| |||||||||||||| ||||| ||||| || ||||| || |||
Sbjct: 443 gtgttccgtgaaggagtgaagtatggtgctggaattggccctggtgtctacgacatccac 502
Query: 589 tcacctagaatccc 602
|| || ||||||||
Sbjct: 503 tccccaagaatccc 516
>gnl|LJGI|TC81903 homologue to UniRef100_Q71EW8 Cluster: Methionine synthase; n=2;
Papilionoideae|Rep: Methionine synthase - Glycine max
(Soybean), partial (13%)
Length = 300
Score = 113 bits (57), Expect = 2e-24
Identities = 162/197 (82%)
Strand = Plus / Plus
Query: 121 gctcaaagtctgaccaaacgacctatgaagggaatgcttactgggcctgttactattctg 180
||||| ||| |||||||||| || ||||| ||||||||||| || || || || |||||
Sbjct: 83 gctcagagtatgaccaaacgcccaatgaaaggaatgcttaccggcccagtaaccattctc 142
Query: 181 aactggtcctttgtgagagatgaccagcctcgatttgaaacctgctaccagattgctttg 240
||||||||||| || ||| |||| || ||| ||| ||| || ||||||||||||||||
Sbjct: 143 aactggtccttcgttagaaatgatcaacctagatctgagactacctaccagattgctttg 202
Query: 241 gctatcaaggatgaggttgaggatcttgagaaagctggtatctctgtcatccagattgat 300
|||||||||||||| || || |||||||| |||| |||||| ||| ||||| || ||
Sbjct: 203 gctatcaaggatgaagtagaagatcttgaaaaaggtggtattggtgttatccaaatcgac 262
Query: 301 gaggctgctctgagaga 317
||||||||| |||||||
Sbjct: 263 gaggctgctttgagaga 279
>gnl|LJGI|DC599664 homologue to UniRef100_Q71EW8 Cluster: Methionine synthase; n=2;
Papilionoideae|Rep: Methionine synthase - Glycine max
(Soybean), partial (25%)
Length = 568
Score = 95.6 bits (48), Expect = 4e-19
Identities = 90/104 (86%)
Strand = Plus / Plus
Query: 1 atggttgagtactttggagaacaattatctggctttgctttcactgccaatgggtgggtg 60
||||||||||||||||| || || |||||||| ||||| || |||| |||||||||||||
Sbjct: 384 atggttgagtactttggtgagcagttatctggttttgcctttactgtcaatgggtgggtg 443
Query: 61 caatcatatggatcccgctgtgtcaaaccacctatcatctatgg 104
||||| || ||||| || ||||| || ||||| |||||||||||
Sbjct: 444 caatcttacggatctcgttgtgtgaagccaccaatcatctatgg 487
>gnl|LJGI|TC78694 homologue to UniRef100_Q4H1G2 Cluster: Methionine synthase; n=1;
Beta vulgaris|Rep: Methionine synthase - Beta vulgaris
(Sugar beet), partial (23%)
Length = 632
Score = 77.8 bits (39), Expect = 9e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 1 atggttgagtactttggagaacaattatctggctttgct 39
|||||||||||||||||||||||||||||||||||||||
Sbjct: 594 atggttgagtactttggagaacaattatctggctttgct 632
>gnl|LJGI|AV415311 UniRef100_Q71EW8 Cluster: Methionine synthase; n=2;
Papilionoideae|Rep: Methionine synthase - Glycine max
(Soybean), partial (8%)
Length = 399
Score = 61.9 bits (31), Expect = 5e-09
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 7 gagtactttggagaacaattatctggctttgctttcactgccaatgggtgggtgcaatca 66
||||||||||| || || || || |||||||| || || | |||||||||||||||||
Sbjct: 208 gagtactttggcgagcagttgtcaggctttgcctttacagttaatgggtgggtgcaatcc 267
Query: 67 tatggatcccgctgtgtcaaaccacctatcatcta 101
|||||||| || ||||| || ||||| ||||||||
Sbjct: 268 tatggatctcgttgtgtgaagccaccaatcatcta 302