Miyakogusa Predicted Gene
- Lj0g3v0068479.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0068479.2 Non Chatacterized Hit- tr|I1M494|I1M494_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54214
PE,59.92,0,HLH,Helix-loop-helix domain; GB DEF: BHLH TRANSCRIPTION
FACTOR,NULL; SERINE/THREONINE-PROTEIN KINASE,CUFF.3251.2
(2733 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS352562 similar to UniRef100_Q2HVX8 Cluster: Helix-loo... 1481 0.0
gnl|LJGI|TC77387 similar to UniRef100_Q2HVX8 Cluster: Helix-loop... 755 0.0
gnl|LJGI|TC77688 similar to UniRef100_Q2HVX8 Cluster: Helix-loop... 418 e-116
>gnl|LJGI|FS352562 similar to UniRef100_Q2HVX8 Cluster: Helix-loop-helix DNA-binding;
n=2; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic), partial
(25%)
Length = 751
Score = 1481 bits (747), Expect = 0.0
Identities = 750/751 (99%)
Strand = Plus / Minus
Query: 1760 attcagtccatgtaccagtatcagaaagtggcattttttctgggattggaacagatcacc 1819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 attcagtccatgtaccagtatcagaaagtggcattttttctgggattggaacagatcacc 692
Query: 1820 tcttggatgctgtcgtctcaaaggccaaacctattacaagacagaattcggatgacatgt 1879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tcttggatgctgtcgtctcaaaggccaaacctattacaagacagaattcggatgacatgt 632
Query: 1880 cttgctggacaacagtgacagggagcagcacctcctctgttccctccccagttttcaaga 1939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 cttgctggacaacagtgacagggagcagcacctcctctgttccctccccagttttcaaga 572
Query: 1940 aggttgggcctggtcatttgcaagggggattgtttaatttttctaagaatggtggtaaaa 1999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aggttgggcctggtcatttgcaagggggattgtttaatttttctaagaatggtggtaaaa 512
Query: 2000 ccggtactgtagaaactagttctctaaggtctagatgtagcaaggatgatgctgggaaaa 2059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ccggtactgtagaaactagttctctaaggtctagatgtagcaaggatgatgctgggaaaa 452
Query: 2060 gttctccatcttctgctatttatgggtcacaacttagttcatggattgagaatgttggcg 2119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gttctccatcttctgctatttatgggtcacaacttagttcatggattgagaatgttggcg 392
Query: 2120 gcgatgtgaagtgtgaaaatagtgtttcaactggatactcgaagcagtcgcgcgaagctg 2179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gcgatgtgaagtgtgaaaatagtgtttcaactggatactcgaagcagtcgcgcgaagctg 332
Query: 2180 gtaaatcaaatcgtaaaaggcttaaactaggagagaatcccaggcctcgaccaaaagatc 2239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gtaaatcaaatcgtaaaaggcttaaactaggagagaatcccaggcctcgaccaaaagatc 272
Query: 2240 gccaaatgattcaagatcgtgtgaaagagctacgagaacttgtgccaaatggagaaaaat 2299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gccaaatgattcaagatcgtgtgaaagagctacgagaacttgtgccaaatggagaaaaat 212
Query: 2300 gtagcatagatgcactactggaaaggaccataaagcatatgcgtttcatgcaaagtgtga 2359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gtagcatagatgcactactggaaaggaccataaagcatatgcgtttcatgcaaagtgtga 152
Query: 2360 caaagcatgctgacaagctgaaacagacaggggagtctaagattattagtaaggaaggtg 2419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 caaagcatgctgacaagctgaaacagacaggggagtctaagattattagtaaggaaggtg 92
Query: 2420 ggctccttttggaagacatatttgagggggctacacgggcgtacgagctcggatcccagt 2479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 ggctccttttggaagacatatttgagggggctacacgggcgtacgagctcggatcccagt 32
Query: 2480 caatgttttgccctctcatagttgatgatct 2510
||||||||||||||||||||||||| |||||
Sbjct: 31 caatgttttgccctctcatagttgaagatct 1
>gnl|LJGI|TC77387 similar to UniRef100_Q2HVX8 Cluster: Helix-loop-helix DNA-binding;
n=2; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic),
partial (17%)
Length = 899
Score = 755 bits (381), Expect = 0.0
Identities = 381/381 (100%)
Strand = Plus / Plus
Query: 1 atggggtttttgttgaaagaagctttgaagtctctgtgtgatcggaaccagtggtcttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 atggggtttttgttgaaagaagctttgaagtctctgtgtgatcggaaccagtggtcttat 482
Query: 61 gctgttttctggaagatcggttgtcaaaattccaagctgttaatttgggaagattgctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gctgttttctggaagatcggttgtcaaaattccaagctgttaatttgggaagattgctat 542
Query: 121 tatgaacccttgccatgtccattccctccacgtaattttgggacgtcatctcagctaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tatgaacccttgccatgtccattccctccacgtaattttgggacgtcatctcagctaggg 602
Query: 181 attcaagaggaggacagagtcggttctttgattaacaaaatggcagtaaataattcagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 attcaagaggaggacagagtcggttctttgattaacaaaatggcagtaaataattcagtc 662
Query: 241 gttgttgcaggtgaaggtatgattggacgggctgcattttcaggcagccatcagtggatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gttgttgcaggtgaaggtatgattggacgggctgcattttcaggcagccatcagtggatt 722
Query: 301 cttttgtacaatttcactacagatgcatatccacctgaggtaaatgctgaagtgtttcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 cttttgtacaatttcactacagatgcatatccacctgaggtaaatgctgaagtgtttcac 782
Query: 361 caaatttcagctggaatgcag 381
|||||||||||||||||||||
Sbjct: 783 caaatttcagctggaatgcag 803
Score = 196 bits (99), Expect = 5e-49
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 457 cagacagtagcagttattcctgtgctgcctcacggcgttgttcaacttggttcattcttg 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cagacagtagcagttattcctgtgctgcctcacggcgttgttcaacttggttcattcttg 860
Query: 517 ccaataatggagaatttgggatttttgaatggtgtgaaa 555
|||||||||||||||||||||||||||||||||||||||
Sbjct: 861 ccaataatggagaatttgggatttttgaatggtgtgaaa 899
>gnl|LJGI|TC77688 similar to UniRef100_Q2HVX8 Cluster: Helix-loop-helix DNA-binding;
n=2; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic), partial
(30%)
Length = 1157
Score = 418 bits (211), Expect = e-116
Identities = 504/602 (83%), Gaps = 4/602 (0%)
Strand = Plus / Plus
Query: 2123 atgtgaagtgtgaaaatagtgtttcaactggatactcgaagcagtcgcgcgaagctggta 2182
|||||||| |||||||||||| ||||||||||||||| ||| | || ||||| || |
Sbjct: 215 atgtgaagcgtgaaaatagtgcttcaactggatactctaagaggccggatgaagcaggca 274
Query: 2183 aatcaaatcgtaaaaggcttaaactaggagagaatcccaggcctcgaccaaaagatcgcc 2242
|| ||||||||||| ||||||||| ||||||||| |||||||||||||| |||||||| |
Sbjct: 275 aaacaaatcgtaaacggcttaaaccaggagagaaccccaggcctcgacctaaagatcgtc 334
Query: 2243 aaatgattcaagatcgtgtgaaagagctacgagaacttgtgccaaatgga-gaaaaatgt 2301
|||||||||||||||||||||||||| | | ||| ||||||| |||||| | |||||||
Sbjct: 335 aaatgattcaagatcgtgtgaaagagttgagggaaattgtgcctaatggaagcaaaatgt 394
Query: 2302 agcatagatgcactactggaaaggaccataaagcatatgcgtttcatgcaaagtgtgaca 2361
|||||||||||||| |||||| ||||||| |||||||||| |||| |||| ||||| ||
Sbjct: 395 agcatagatgcacttctggaacggaccatcaagcatatgcttttcttgcagagtgttacg 454
Query: 2362 aagcatgctgacaagctgaaacagacaggggagtctaagattattagtaaggaaggtggg 2421
||||||||||||||| |||||||||||||||| ||||||||| | ||||| ||||||||
Sbjct: 455 aagcatgctgacaagttgaaacagacaggggaatctaagattgtgagtaaagaaggtgga 514
Query: 2422 ctccttttggaagacatatttgag---ggggctacacgggcgtacgagctcggatcccag 2478
| || || |||| | |||||| |||||||| |||| || ||| | || || ||
Sbjct: 515 ttgctcttaaaagataactttgagggaggggctacttgggcatatgaggttggctcacaa 574
Query: 2479 tcaatgttttgccctctcatagttgatgatctggatcctcctcgtcgaatgttagtggag 2538
|||||| | |||||| |||||||||| ||||| |||||||||| | ||| ||||||||
Sbjct: 575 tcaatggtgtgccctatcatagttgaggatcttaatcctcctcgccagatgctagtggag 634
Query: 2539 atgctttgcgaggaacgaggnnnnnnnctggaaatagctgacttcatcagaggattaggt 2598
||||| |||||||||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 635 atgctctgcgaggaacgaggtttctttctggaaatagctgacttaataagaggattaggt 694
Query: 2599 ctaacaatcttaaagggggtaatggaagctcacggtgacaaaatctgggctcgctttgct 2658
|||||||||| |||||||| |||||||| | | |||||| |||||||| |||||||||
Sbjct: 695 ttaacaatcttgaagggggtcatggaagcccgcaatgacaagatctgggcacgctttgct 754
Query: 2659 gttgaggcaaaccgggacataacgaggatggaaatatttatgccacttgttcatcttttg 2718
|||||||||||| |||| | || |||||||||||||| ||| |||| ||||| ||| ||
Sbjct: 755 gttgaggcaaacagggatgtgacaaggatggaaatattcatgtcactagttcaacttgtg 814
Query: 2719 ga 2720
||
Sbjct: 815 ga 816