Miyakogusa Predicted Gene
- Lj0g3v0068469.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0068469.1 tr|G7IRI9|G7IRI9_MEDTR Condensin complex subunit
2 OS=Medicago truncatula GN=MTR_2g087880 PE=3
SV=1,69.14,0,Cnd2,Condensin complex subunit 2/barren; GB DEF:
HYPOTHETICAL PROTEIN AT2G32590,NULL; FAMILY NOT NAM,CUFF.3266.1
(1848 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60387 similar to UniRef100_Q2HT10 Cluster: Barren; n=... 1130 0.0
gnl|LJGI|TC62790 similar to UniRef100_Q2HT10 Cluster: Barren; n=... 799 0.0
gnl|LJGI|FS329720 similar to UniRef100_Q2HT10 Cluster: Barren; n... 236 4e-61
>gnl|LJGI|TC60387 similar to UniRef100_Q2HT10 Cluster: Barren; n=1; Medicago
truncatula|Rep: Barren - Medicago truncatula (Barrel
medic), partial (32%)
Length = 864
Score = 1130 bits (570), Expect = 0.0
Identities = 570/570 (100%)
Strand = Plus / Plus
Query: 225 gaacttcccctcccgagaccccgattctgatccttgtctcaccaaggaccagattctcga 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gaacttcccctcccgagaccccgattctgatccttgtctcaccaaggaccagattctcga 354
Query: 285 cttgttccacaactgcataaagcttgccgccgaaaataaaattaatcagaagaatacatg 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 cttgttccacaactgcataaagcttgccgccgaaaataaaattaatcagaagaatacatg 414
Query: 345 ggagttgaaattgattgatcatcttacggatttcataaggactgaagaagaaagcgatgt 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ggagttgaaattgattgatcatcttacggatttcataaggactgaagaagaaagcgatgt 474
Query: 405 agagaccaactttcaaattgcaagctgcactcttgaagctggagtcaaaatttattcact 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 agagaccaactttcaaattgcaagctgcactcttgaagctggagtcaaaatttattcact 534
Query: 465 aagggtggactcagtgcattctgaggcatataaagtccttgctagaatgaacagagtcgg 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aagggtggactcagtgcattctgaggcatataaagtccttgctagaatgaacagagtcgg 594
Query: 525 ccaagaagctgaggaagactctactctggatagtgttaatgctgaagatggacatgaaga 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ccaagaagctgaggaagactctactctggatagtgttaatgctgaagatggacatgaaga 654
Query: 585 aagcaagaaggggattgacaaaaagttgtcacccttgtcaacattggagtcatcattcga 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 aagcaagaaggggattgacaaaaagttgtcacccttgtcaacattggagtcatcattcga 714
Query: 645 ggctcttaatgtaaagaagtttgatgttgcatttgctgtggatcccctctatcgccacac 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ggctcttaatgtaaagaagtttgatgttgcatttgctgtggatcccctctatcgccacac 774
Query: 705 atcagcacaatttgacgaaggtggagctaaaggtctattgatgaataatctcggtgtata 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 atcagcacaatttgacgaaggtggagctaaaggtctattgatgaataatctcggtgtata 834
Query: 765 tggtggatgtagggtactctttgattcact 794
||||||||||||||||||||||||||||||
Sbjct: 835 tggtggatgtagggtactctttgattcact 864
Score = 319 bits (161), Expect = 3e-86
Identities = 164/165 (99%)
Strand = Plus / Plus
Query: 1 atgaacccagaatctccctcacacatccgcacttcaatgccggaaaccaccgtaagccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 atgaacccagaatctccctcacacatccgcacttcaatgccggaaaccaccgtaagccct 130
Query: 61 aatcccacgacggcggctcccagcaagaggcttcccgtcgccgcccgcatactttctccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 aatcccacgacggcggctcccagcaagaggcttcccgtcgccgcccgcatactttctccg 190
Query: 121 acgtcgccggttttcatcggctccaacgacgaccaggtcgaacgt 165
|||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 191 acgtcgccggttttcatcggctccaacgacgaccaggttgaacgt 235
>gnl|LJGI|TC62790 similar to UniRef100_Q2HT10 Cluster: Barren; n=1; Medicago
truncatula|Rep: Barren - Medicago truncatula (Barrel
medic), partial (26%)
Length = 887
Score = 799 bits (403), Expect = 0.0
Identities = 417/421 (99%), Gaps = 3/421 (0%)
Strand = Plus / Plus
Query: 1421 cagatatcttttgtcctcccaagaattccaaatcgttactgctccctgaaaatagaccac 1480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagatatcttttgtcttcccaagaattccaaatcgttactgctccctgaaaatagaccac 60
Query: 1481 cttgtgttacaaaacttccggaggactgccactatgagccacaggatcttgttaagctat 1540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttgtgttacaaaacttccggaggactgccactatgagccacaggatcttgttaagctat 120
Query: 1541 ttcttttgcctaatgtaaagtgtcttgggaggagggcaagaaagttatcag---atgttt 1597
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 121 ttcttttgcctaatgtaaagtgtcttgggaggagggcaagaaagttatcaggtgatgttt 180
Query: 1598 ctgaagaacaaggcaatgactatgaatcattcccttcctgggataatggaggtgttggtg 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgaagaacaaggcaatgactatgaatcattcccttcctgggataatggaggtgttggtg 240
Query: 1658 atggcgagtatgatggtgatacgcacagtgacatagatgaccctagcacacttatttctc 1717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atggcgagtatgatggtgatacgcacagtgacatagatgaccctagcacacttatttctc 300
Query: 1718 agcctcgtcgggtcaataaaattgaagtcgactatgacaaaacatccaaacaagttgatg 1777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agcctcgtcgggtcaataaaattgaagtcgactatgacaaaacatccaaacaagttgatg 360
Query: 1778 ttcaggcactgaagattgctctttgggaccatattcaagaatctattcaacttcatgttc 1837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcaggcactgaagattgctctttgggaccatattcaagaatctattcaacttcatgttc 420
Query: 1838 c 1838
|
Sbjct: 421 c 421
>gnl|LJGI|FS329720 similar to UniRef100_Q2HT10 Cluster: Barren; n=1; Medicago
truncatula|Rep: Barren - Medicago truncatula (Barrel
medic), partial (28%)
Length = 728
Score = 236 bits (119), Expect = 4e-61
Identities = 380/467 (81%)
Strand = Plus / Plus
Query: 253 gatccttgtctcaccaaggaccagattctcgacttgttccacaactgcataaagcttgcc 312
||||| || |||| |||| | ||||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 261 gatccctgcctcaacaagcagcagatcctcgatttgttccagaattgcatcaagctcgcc 320
Query: 313 gccgaaaataaaattaatcagaagaatacatgggagttgaaattgattgatcatcttacg 372
||| || ||||||||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 321 agcgagaacaaaattaatcagaagaacacgtgggagttgaacttgattgaccaccttact 380
Query: 373 gatttcataaggactgaagaagaaagcgatgtagagaccaactttcaaattgcaagctgc 432
||| | || | | ||||||| ||| |||| ||||| || || || | ||||| |||
Sbjct: 381 gatattatcaaggctgaagatgaacctgatgcggagactaatttccagaaggcaagttgc 440
Query: 433 actcttgaagctggagtcaaaatttattcactaagggtggactcagtgcattctgaggca 492
|| ||||||||||||||||||||||||||| ||||||| || || |||||||| |||||
Sbjct: 441 acacttgaagctggagtcaaaatttattcattaagggtagattctgtgcattccgaggcg 500
Query: 493 tataaagtccttgctagaatgaacagagtcggccaagaagctgaggaagactctactctg 552
||||||||||||| | | ||||| |||| |||||||| |||||||||||| ||||| |
Sbjct: 501 tataaagtccttggtgggatgaatagagcaggccaagatgctgaggaagacactactgcg 560
Query: 553 gatagtgttaatgctgaagatggacatgaagaaagcaagaaggggattgacaaaaagttg 612
|| ||| ||| |||| |||||| |||| || || ||| | || || |||||||||
Sbjct: 561 gagggtgataacattgaaagtggacaagaaggaaacaggaaagagacagataaaaagttg 620
Query: 613 tcacccttgtcaacattggagtcatcattcgaggctcttaatgtaaagaagtttgatgtt 672
|| || ||||||||| |||| |||| || |||||||||||||||||||||||||| | |
Sbjct: 621 tcgcctttgtcaacactggaaccatcttttgaggctcttaatgtaaagaagtttgacgct 680
Query: 673 gcatttgctgtggatcccctctatcgccacacatcagcacaatttga 719
||||||| ||||||||||||||||||||| || ||||| |||||||
Sbjct: 681 gcatttgttgtggatcccctctatcgccagactacagcaaaatttga 727