Miyakogusa Predicted Gene
- Lj0g3v0068279.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0068279.1 Non Chatacterized Hit- tr|H9WV19|H9WV19_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,59.02,0.0000000001,seg,NULL,
NODE_2536_length_1224_cov_287.145416.path1.1
(745 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64357 similar to UniRef100_Q9LN08 Cluster: T6D22.8; n... 1191 0.0
gnl|LJGI|TC70985 similar to UniRef100_A7NZK1 Cluster: Chromosome... 238 4e-62
gnl|LJGI|AV768588 similar to UniRef100_A7WG14 Cluster: Homoserin... 149 3e-35
gnl|LJGI|BP053054 weakly similar to UniRef100_Q9LN08 Cluster: T6... 133 2e-30
gnl|LJGI|TC82737 similar to UniRef100_A7NZK1 Cluster: Chromosome... 94 1e-18
gnl|LJGI|BP075663 90 2e-17
>gnl|LJGI|TC64357 similar to UniRef100_Q9LN08 Cluster: T6D22.8; n=1; Arabidopsis
thaliana|Rep: T6D22.8 - Arabidopsis thaliana (Mouse-ear
cress), partial (9%)
Length = 1027
Score = 1191 bits (601), Expect = 0.0
Identities = 601/601 (100%)
Strand = Plus / Plus
Query: 145 ggatcaacagacagcaattccatgaatggaggcgctatgaactttgaaagcgaaaacaca 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggatcaacagacagcaattccatgaatggaggcgctatgaactttgaaagcgaaaacaca 61
Query: 205 agtgcttcacatgatactggattcttcaggtttgaggcatcagacaaggaagggtcgtat 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agtgcttcacatgatactggattcttcaggtttgaggcatcagacaaggaagggtcgtat 121
Query: 265 ggtgatagacccatgcctgattgggtgggatggggggaaccttcagatatgcaagttggt 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggtgatagacccatgcctgattgggtgggatggggggaaccttcagatatgcaagttggt 181
Query: 325 aactcaagcacgaatccctttgtagatcatgatgagtctggaaataacctttctagtaaa 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aactcaagcacgaatccctttgtagatcatgatgagtctggaaataacctttctagtaaa 241
Query: 385 cctgaattaggtagccctaatcctagttctccttcaaacggggaaactgtttcttcaaat 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cctgaattaggtagccctaatcctagttctccttcaaacggggaaactgtttcttcaaat 301
Query: 445 gggttgccatctactatagattccatggaggggattgtggagtcaagtcaaagatcagga 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gggttgccatctactatagattccatggaggggattgtggagtcaagtcaaagatcagga 361
Query: 505 gcagtaccctcgctgtttgaggaggatgttgaatttgtaggtgtagaattagaaggcact 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcagtaccctcgctgtttgaggaggatgttgaatttgtaggtgtagaattagaaggcact 421
Query: 565 gagaaggctatggatcaggctctgaaagaagggatagttggggaagcaggaccattgaaa 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gagaaggctatggatcaggctctgaaagaagggatagttggggaagcaggaccattgaaa 481
Query: 625 agaaacatggtccctaaagtggcagaaaaggaaaattccgaagagggcggtgccggagtg 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 agaaacatggtccctaaagtggcagaaaaggaaaattccgaagagggcggtgccggagtg 541
Query: 685 aaggaattcaatgatactaactactggagggttgaccaagaggttgctgttctagagtga 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aaggaattcaatgatactaactactggagggttgaccaagaggttgctgttctagagtga 601
Query: 745 t 745
|
Sbjct: 602 t 602
>gnl|LJGI|TC70985 similar to UniRef100_A7NZK1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 1341
Score = 238 bits (120), Expect = 4e-62
Identities = 592/748 (79%), Gaps = 6/748 (0%)
Strand = Plus / Plus
Query: 1 atgatggatgagataaacttgaacggtgctgcaaatagtggt---agcagtagtgatgat 57
||||||||||| |||||||||| || |||| |||| ||||| |||||||||||||||
Sbjct: 160 atgatggatgaagtaaacttgaatggagctgtaaatggtggtggcagcagtagtgatgat 219
Query: 58 gaggtagtggttggagaggatgaagaactggatgaaagcaaaaatactctgaacggtaca 117
|||||||| ||||||||||||||||| || || |||||||||||| |||| ||||||
Sbjct: 220 gaggtagtagttggagaggatgaagacttgaccgacagcaaaaatactgtgaatggtaca 279
Query: 118 tctagctcgaacacagactttatcagtggatcaacagacagcaattccatgaatggaggc 177
|| ||||| |||||| |||| | ||||||| || | | |||||||| ||| |||
Sbjct: 280 tccagctcaaacacaaacttctttagtggattaagcggtaatgattccatggatgaaggt 339
Query: 178 gctatgaactttgaaagcgaaaacacaagtgcttcacatgatactggattcttcaggttt 237
||| | | || |||| || | |||| ||||| ||||||| |||||||||||||||
Sbjct: 340 gctgtagatttagaaaatgagagggcaagcgcttcgcatgatatgggattcttcaggttt 399
Query: 238 gaggcatcagacaaggaagggtcgtatggtgatagacccatgcctgattgggtgggatgg 297
|| | | | ||||| || | | || ||| ||||| || | || |||||||||||||||
Sbjct: 400 gaagtacccgacaatgaggacttgtttggggataggcctttaccagattgggtgggatgg 459
Query: 298 ggggaaccttcagatatgcaagttggtaactcaagcacgaatccctttgtagatcatgat 357
|| |||| ||||| |||||||||| | ||||| | |||||||||| | ||| ||||
Sbjct: 460 ggtgaacaatcagagatgcaagttgctggttcaagtatgaatccctttttggataatgac 519
Query: 358 gagtctggaaataacctttctagtaaacctgaattaggtagccctaatcctagttctcct 417
|||||||| | || || ||| ||| | |||| ||| || ||| ||||||
Sbjct: 520 gagtctggtagcaattcgcgtactaagcctcacctaggcagcactgatctgagttct--- 576
Query: 418 tcaaacggggaaactgtttcttcaaatgggttgccatctactatagattccatggagggg 477
||||| |||||| |||| ||||||||||| |||||| | ||| ||||| |||| ||
Sbjct: 577 tcaaatggggaatctgtatcttcaaatggtttgccagccactgaggattcattggacggt 636
Query: 478 attgtggagtcaagtcaaagatcaggagcagtaccctcgctgtttgaggaggatgttgaa 537
|| || ||||| |||||||| | || ||||||||| || ||||| |||||||| |||
Sbjct: 637 ggtggtgattcaagccaaagatccgtagtagtaccctccctatttgaagaggatgtggaa 696
Query: 538 tttgtaggtgtagaattagaaggcactgagaaggctatggatcaggctctgaaagaaggg 597
|||||||||||||||||||| || | |||||||| ||||| |||||||| ||||||||
Sbjct: 697 tttgtaggtgtagaattagatggtgccgagaaggcaatggaccaggctctcaaagaagga 756
Query: 598 atagttggggaagcaggaccattgaaaagaaacatggtccctaaagtggcagaaaaggaa 657
||||||||||||||||||||||| ||||||||| | ||||| || || |||||||||||
Sbjct: 757 atagttggggaagcaggaccattaaaaagaaacctagtcccagaattgccagaaaaggaa 816
Query: 658 aattccgaagagggcggtgccggagtgaaggaattcaatgatactaactactggagggtt 717
|||||||| |||| | || | || |||||||| |||||||| | || ||||||||| ||
Sbjct: 817 aattccgatgaggccagtccgggtgtgaaggagttcaatgacgcaaattactggaggatt 876
Query: 718 gaccaagaggttgctgttctagagtgat 745
||||||||||||||||||||||| ||||
Sbjct: 877 gaccaagaggttgctgttctagaatgat 904
>gnl|LJGI|AV768588 similar to UniRef100_A7WG14 Cluster: Homoserine dehydrogenase; n=1;
Hydrogenobaculum sp. Y04AAS1|Rep: Homoserine
dehydrogenase, partial (3%)
Length = 393
Score = 149 bits (75), Expect = 3e-35
Identities = 114/127 (89%)
Strand = Plus / Minus
Query: 609 agcaggaccattgaaaagaaacatggtccctaaagtggcagaaaaggaaaattccgaaga 668
|||||| || || |||| |||||||||||||||||||||| |||| ||||||||| || |
Sbjct: 393 agcaggcccctttaaaaaaaacatggtccctaaagtggcaaaaaaagaaaattccaaaaa 334
Query: 669 gggcggtgccggagtgaaggaattcaatgatactaactactggagggttgaccaagaggt 728
|||||| ||||||||||||||||||||| ||||||||| ||||||||||| |||| ||||
Sbjct: 333 gggcggggccggagtgaaggaattcaattatactaactcctggagggttggccaaaaggt 274
Query: 729 tgctgtt 735
|||||||
Sbjct: 273 tgctgtt 267
>gnl|LJGI|BP053054 weakly similar to UniRef100_Q9LN08 Cluster: T6D22.8; n=1;
Arabidopsis thaliana|Rep: T6D22.8 - Arabidopsis thaliana
(Mouse-ear cress), partial (3%)
Length = 457
Score = 133 bits (67), Expect = 2e-30
Identities = 85/89 (95%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 652 aaggaaaattccgaagagggcggtgc-cggagtgaaggaattcaatgatactaactactg 710
||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 457 aaggaaaattccgaagagg-cggtgcncggagtgaaggaattcaatgatactaactactg 399
Query: 711 gagggttgaccaagaggttgctgttctag 739
|||| |||||| |||||||||||||||||
Sbjct: 398 gaggnttgaccnagaggttgctgttctag 370
>gnl|LJGI|TC82737 similar to UniRef100_A7NZK1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 613
Score = 93.7 bits (47), Expect = 1e-18
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 1 atgatggatgagataaacttgaacggtgctgcaaatagtggtagcag 47
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 atgatggatgagataaacttgaacggtgctgcaaatagtggtagcag 613
>gnl|LJGI|BP075663
Length = 451
Score = 89.7 bits (45), Expect = 2e-17
Identities = 102/117 (87%), Gaps = 3/117 (2%)
Strand = Plus / Minus
Query: 575 tggatcaggctctgaaagaagggatagttggggaagcaggaccattgaaaagaaaca-tg 633
|||||||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct: 451 tggatcaggctctgaaagaagggatagttggggaagcaggccccggcccaagaaacagtg 392
Query: 634 gtccctaaagtggcagaaaaggaaaa-ttccgaaga-gggcggtgccggagtgaagg 688
|||| ||| ||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 391 gtccgtaacctggcagagaaggaaaaggtccgaagacgggcggtgccggagtgaagg 335