Miyakogusa Predicted Gene
- Lj0g3v0068129.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0068129.1 tr|F2E3C5|F2E3C5_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,48.87,8e-19,FAMILY NOT
NAMED,NULL; coiled-coil,NULL; seg,NULL,CUFF.3244.1
(930 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71246 similar to UniRef100_A7PEV1 Cluster: Chromosome... 1231 0.0
>gnl|LJGI|TC71246 similar to UniRef100_A7PEV1 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (75%)
Length = 1285
Score = 1231 bits (621), Expect = 0.0
Identities = 659/678 (97%)
Strand = Plus / Plus
Query: 144 cgttttctgggctccgacgccgctcgcggccaagtcgtgggctgatgttgacgatgaaga 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 cgttttctgggctccgacgccgctcgcggccaagtcgtgggctgatgttgacgatgaaga 365
Query: 204 cgatgatgattattacgctaccaccgctcctcctgattccgtttgggtcgatcctgagaa 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cgatgatgattattacgctaccaccgctcctcctgattccgtttgggtcgatcctgagaa 425
Query: 264 atccaatgagagtgatgctgcaattgaggaaagtgaaagtgaggaagatggtcttgatga 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 atccaatgagagtgatgctgcaattgaggaaagtgaaagtgaggaagatggtcttgatga 485
Query: 324 tgtggaagatgatgctgaggacgaacatgaaaatgacatagaggttccagtagatactga 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tgtggaagatgatgctgaggacgaacatgaaaatgacatagaggttccagtagatactga 545
Query: 384 acctgttcttgagaatcctcctcaaccctcattggctaccaaagaaaccgaaagacagct 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 acctgttcttgagaatcctcctcaaccctcattggctaccaaagaaaccgaaagacagct 605
Query: 444 ttccaagaaggaactgaagaaaaaagggcttgaagagcttgaagccgtgttggctgagct 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ttccaagaaggaactgaagaaaaaagggcttgaagagcttgaagccgtgttggctgagct 665
Query: 504 aggattttctcaaacagaacctagtggtgacaaagattccaatgatctggagaagaaaga 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 aggattttctcaaacagaacctagtggtgacaaagattccaatgatctggagaagaaaga 725
Query: 564 agaggatcacaatagtgtggtggtaaagaaggagattgcttctggggaaagcaaaagtgc 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 agaggatcacaatagtgtggtggtaaagaaggagattgcttctggggaaagcaaaagtgc 785
Query: 624 nnnnnnnnnnnnnnnnnnngataaatcttcaaaggagcagaaagaatctcaagaacagtc 683
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 aagaaagaagaagaagaaggataaatcttcaaaggagcagaaagaatctcaagaacagtc 845
Query: 684 tgatggcgtggatgttggaagtacaacttctctcactgctggcacagagaaggcagagga 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 tgatggcgtggatgttggaagtacaacttctctcactgctggcacagagaaggcagagga 905
Query: 744 tgcttctgctactgatgttagagaactgcttaagaaagctgcttctttgaagaagaaaaa 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 tgcttctgctactgatgttagagaactgcttaagaaagctgcttctttgaagaagaaaaa 965
Query: 804 gtcaagcaaggaactgga 821
||||||||||||||||||
Sbjct: 966 gtcaagcaaggaactgga 983
Score = 165 bits (83), Expect = 6e-40
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 atggtcggcggaggaagcaggagggaggatgcggcagcgccgccggtgagcagcaccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 atggtcggcggaggaagcaggagggaggatgcggcagcgccgccggtgagcagcaccaac 222
Query: 61 attttcgcggcgctcgggagctt 83
|||||||||||||||||||||||
Sbjct: 223 attttcgcggcgctcgggagctt 245
Score = 103 bits (52), Expect = 2e-21
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 879 atccaagaaaaaagagaaggggcactataatcagcaaccagttcggtaaaca 930
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 atccaagaaaaaagagaaggggcactataatcagcaaccagttcggtaaaca 1092