Miyakogusa Predicted Gene
- Lj0g3v0068009.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0068009.1 Non Chatacterized Hit- tr|K4AQG4|K4AQG4_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,26.56,2e-18,F_box_assoc_1: F-box protein interaction
domain,F-box associated interaction domain; A Receptor for
,CUFF.3231.1
(1199 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV424374 weakly similar to UniRef100_Q0J1D5 Cluster: Os... 125 7e-28
gnl|LJGI|TC73835 107 2e-22
gnl|LJGI|TC73335 88 1e-16
gnl|LJGI|GO024807 82 9e-15
>gnl|LJGI|AV424374 weakly similar to UniRef100_Q0J1D5 Cluster: Os09g0448100 protein;
n=1; Oryza sativa Japonica Group|Rep: Os09g0448100
protein - Oryza sativa subsp. japonica (Rice), partial
(8%)
Length = 402
Score = 125 bits (63), Expect = 7e-28
Identities = 120/139 (86%)
Strand = Plus / Plus
Query: 291 tgtttcctctgaaattttgaaccctccttatgaatatgattctgactacaaatactggac 350
||||||||||||| || | |||||||| | |||||| |||||||| | ||||||||||
Sbjct: 211 tgtttcctctgaacttctaaaccctccctctgaatacaattctgaccgccaatactggac 270
Query: 351 tgaaatcatgggtccttgcaatggcatatacttcctagaaggcaatccaaatgtcatgat 410
||||||||||| ||||||||||||||||||| || |||||| ||||||||| ||||
Sbjct: 271 agaaatcatgggcccttgcaatggcatatactatttaaaaggcagcccaaatgtcctgat 330
Query: 411 gaacccttctttgagacag 429
|||||||||||||||||||
Sbjct: 331 gaacccttctttgagacag 349
Score = 63.9 bits (32), Expect = 2e-09
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 79 gatttgatgaaatccaagtgcgtttgcaaatactggttcaatctcataactgatcctcat 138
|||||| |||||| ||| | |||||||||| |||||||||||||||| |||||||| ||
Sbjct: 32 gatttggtgaaatgcaaatctgtttgcaaatcctggttcaatctcatatctgatccttat 91
Query: 139 ttcattacaaattactatgttgtttacaacaa 170
|| ||| |||||||||| | | ||||||||
Sbjct: 92 tttgctaccaattactatgctttctacaacaa 123
>gnl|LJGI|TC73835
Length = 549
Score = 107 bits (54), Expect = 2e-22
Identities = 118/138 (85%), Gaps = 1/138 (0%)
Strand = Plus / Plus
Query: 297 ctctgaaattttgaaccctccttatgaatatgattctgactacaaatactggactgaaat 356
||||||| || | |||||||| | |||||| ||||| || ||| || ||||||||||||
Sbjct: 86 ctctgaacttctaaaccctccctctgaatacaattctaaccacacattctggactgaaat 145
Query: 357 catgggtccttgcaatggcatatacttcctagaaggcaatccaaatgtcatgatgaa-cc 415
||||| |||||||||||||||||||| ||| ||||| | ||||||||| ||||||| ||
Sbjct: 146 tatgggcccttgcaatggcatatactttctaaaaggcgaaccaaatgtcctgatgaatcc 205
Query: 416 cttctttgagacagttca 433
|||||||||||| |||||
Sbjct: 206 cttctttgagacggttca 223
Score = 56.0 bits (28), Expect = 5e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 536 aaattgggatttggacagctgagttatacagcttcaattccaactcttggag 587
||||||||| ||||||| |||||||||||| |||||| ||||||||||||
Sbjct: 348 aaattgggaattggacattagagttatacagcctcaatttcaactcttggag 399
>gnl|LJGI|TC73335
Length = 495
Score = 87.7 bits (44), Expect = 1e-16
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 1047 aaaggatcttcaggtttatggaaggtatgattcaattagagctgctagatacatggaaag 1106
||||||||||||||||||||||| || ||| ||| | |||||| | ||||||||||||||
Sbjct: 213 aaaggatcttcaggtttatggaatgtgtgaatcattaagagctacaagatacatggaaag 272
Query: 1107 ccttgtttcact 1118
||||||||||||
Sbjct: 273 ccttgtttcact 284
Score = 69.9 bits (35), Expect = 3e-11
Identities = 95/115 (82%)
Strand = Plus / Plus
Query: 864 gaaaggctttgatgtgtgggtgatgaaagattacttggatgaagggtcttggactaagca 923
|||||||||||| |||||||| ||||||||| | | || ||||| ||||||| || ||
Sbjct: 42 gaaaggctttgacgtgtgggtaatgaaagatcattgtgacgaaggttcttggatgaaaca 101
Query: 924 atacacagttggacacaatgaagtgatgtacaagcttgtggggttttatggaagc 978
|||| | |||||||| | ||||| || |||||| | ||||||||||||||||||
Sbjct: 102 atactctgttggacatagagaagtaatttacaagttggtggggttttatggaagc 156
>gnl|LJGI|GO024807
Length = 644
Score = 81.8 bits (41), Expect = 9e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 535 caaattgggatttggacagctgagttatacagcttcaattccaactcttggag 587
|||||||||| ||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 530 caaattgggaattggacagcagagttatacagcctcaattccaactcttggag 582
Score = 69.9 bits (35), Expect = 3e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 473 attatgctgggtttgggtttgaccccaaaactaatgactacaaagttgttgtcatcaagg 532
||||||||| ||||||||||||||| ||||| |||||||||||||| |||| |||| ||
Sbjct: 444 attatgctgagtttgggtttgacccgaaaaccaatgactacaaagtcattgtgatcatgg 503
Query: 533 acc 535
|||
Sbjct: 504 acc 506
Score = 58.0 bits (29), Expect = 1e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 86 tgaaatccaagtgcgtttgcaaatactggttcaatctcata 126
|||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 132 tgaaatgcaagtccgtttgcaaatcctggttcaatctcata 172