Miyakogusa Predicted Gene
- Lj0g3v0067919.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0067919.1 tr|A9SX66|A9SX66_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_110121,63.16,3e-18,Riboflavin synthase
domain-like,Riboflavin synthase-like beta-barrel; no description,NULL;
seg,NULL,CUFF.3230.1
(481 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78783 similar to UniRef100_Q41014 Cluster: Ferredoxin... 753 0.0
gnl|LJGI|BP062615 similar to UniRef100_Q41014 Cluster: Ferredoxi... 398 e-110
gnl|LJGI|TC76777 similar to UniRef100_Q41014 Cluster: Ferredoxin... 329 9e-90
gnl|LJGI|TC60743 similar to UniRef100_Q41014 Cluster: Ferredoxin... 329 9e-90
gnl|LJGI|GO012258 similar to UniRef100_Q41014 Cluster: Ferredoxi... 278 3e-74
>gnl|LJGI|TC78783 similar to UniRef100_Q41014 Cluster: Ferredoxin--NADP reductase,
root isozyme, chloroplast precursor; n=1; Pisum
sativum|Rep: Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor - Pisum sativum (Garden pea),
partial (24%)
Length = 737
Score = 753 bits (380), Expect = 0.0
Identities = 462/484 (95%), Gaps = 4/484 (0%)
Strand = Plus / Plus
Query: 1 atgtcagtgccagtgcaacaagcgagtgtacccaaag-tgattgtctccccattagaatt 59
||||||||||| |||| || ||||||||||||| ||| ||||||||||||| || | |||
Sbjct: 27 atgtcagtgcccgtgccaccagcgagtgtaccccaagctgattgtctcccccttcgcatt 86
Query: 60 ggaagctgcttcagagcctccattgaacttgcacaagcc-taaacaaccatatacaacaa 118
||||| ||||||||||||||| |||||||||||| |||| ||||| ||||||||| || |
Sbjct: 87 ggaaggtgcttcagagcctcccttgaacttgcaccagccctaaaccaccatataccacca 146
Query: 119 ttgtttctgttgagagaatagtgggaccaaaggc-tccaggggaaacttgtcatattgtg 177
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 147 ttgtttctgttgagagaatagtgggacccaaggcctccaggggaaacttgtcatattgtg 206
Query: 178 attgatcatggtggaaatgttccctactgggaaggacagagctatggttttattccacca 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 attgatcatggtggaaatgttccctactgggaaggacagagctatggttttattccaccc 266
Query: 238 gtaagtgacttgttattgatactcattttgtgcttccgctcctcattgtatctgattagt 297
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 267 gtaagtgacttgttattgatactcattttgtgcttccgctcctccttgtatctgattagt 326
Query: 298 ggacgtgaatccataatgattgatcttcggcttcagaatcttttgtcagttaatttcgat 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ggacgtgaatccataatgattgatcttcggcttcagaatcttttgtcagttaatttcgat 386
Query: 358 gaaaggaccccgttttggatatcttacaatatccaaccaaatgtccttcgtgttcgaagt 417
||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 387 gaaaggaccccgttttggatatcttaccatatccaacc-catgtccttcgtgttcgaagt 445
Query: 418 ttaatattattggtcattggtagaactttacctggttctgccttaccttcacattccatc 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttaatattattggtcattggtagaactttacctggttctgccttaccttcacattccatc 505
Query: 478 tgaa 481
||||
Sbjct: 506 tgaa 509
>gnl|LJGI|BP062615 similar to UniRef100_Q41014 Cluster: Ferredoxin--NADP reductase,
root isozyme, chloroplast precursor; n=1; Pisum
sativum|Rep: Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor - Pisum sativum (Garden pea),
partial (35%)
Length = 496
Score = 398 bits (201), Expect = e-110
Identities = 201/201 (100%)
Strand = Plus / Minus
Query: 38 tgattgtctccccattagaattggaagctgcttcagagcctccattgaacttgcacaagc 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgattgtctccccattagaattggaagctgcttcagagcctccattgaacttgcacaagc 437
Query: 98 ctaaacaaccatatacaacaattgtttctgttgagagaatagtgggaccaaaggctccag 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctaaacaaccatatacaacaattgtttctgttgagagaatagtgggaccaaaggctccag 377
Query: 158 gggaaacttgtcatattgtgattgatcatggtggaaatgttccctactgggaaggacaga 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gggaaacttgtcatattgtgattgatcatggtggaaatgttccctactgggaaggacaga 317
Query: 218 gctatggttttattccaccag 238
|||||||||||||||||||||
Sbjct: 316 gctatggttttattccaccag 296
>gnl|LJGI|TC76777 similar to UniRef100_Q41014 Cluster: Ferredoxin--NADP reductase,
root isozyme, chloroplast precursor; n=1; Pisum
sativum|Rep: Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor - Pisum sativum (Garden pea),
partial (49%)
Length = 774
Score = 329 bits (166), Expect = 9e-90
Identities = 222/240 (92%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 2 tgtcagtgccagtgcaacaagcgagtgtacccaaagtgattgtctccccattagaattgg 61
|||||||||||||||||||||||| || |||||||| | ||||||||||||||||||||
Sbjct: 350 tgtcagtgccagtgcaacaagcgactgggcccaaagttactgtctccccattagaattgg 409
Query: 62 aagctgcttcagagcctccattgaacttgcacaagcctaaacaaccatataca---acaa 118
||| ||| | |||||||| |||||||| ||||||||||||||||| |||||| ||||
Sbjct: 410 aagaagctcccgagcctcccttgaacttacacaagcctaaacaaccttatacagcaacaa 469
Query: 119 ttgtttctgttgagagaatagtgggaccaaaggctccaggggaaacttgtcatattgtga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttgtttctgttgagagaatagtgggaccaaaggctccaggggaaacttgtcatattgtga 529
Query: 179 ttgatcatggtggaaatgttccctactgggaaggacagagctatggttttattccaccag 238
||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 530 ttgatcatgatggaaatgttccctactgggaaggacagagttatggtgttattccaccag 589
>gnl|LJGI|TC60743 similar to UniRef100_Q41014 Cluster: Ferredoxin--NADP reductase,
root isozyme, chloroplast precursor; n=1; Pisum
sativum|Rep: Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor - Pisum sativum (Garden pea),
partial (96%)
Length = 1501
Score = 329 bits (166), Expect = 9e-90
Identities = 222/240 (92%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 2 tgtcagtgccagtgcaacaagcgagtgtacccaaagtgattgtctccccattagaattgg 61
|||||||||||||||||||||||| || |||||||| | ||||||||||||||||||||
Sbjct: 242 tgtcagtgccagtgcaacaagcgactgggcccaaagttactgtctccccattagaattgg 301
Query: 62 aagctgcttcagagcctccattgaacttgcacaagcctaaacaaccatataca---acaa 118
||| ||| | |||||||| |||||||| ||||||||||||||||| |||||| ||||
Sbjct: 302 aagaagctcccgagcctcccttgaacttacacaagcctaaacaaccttatacagcaacaa 361
Query: 119 ttgtttctgttgagagaatagtgggaccaaaggctccaggggaaacttgtcatattgtga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttgtttctgttgagagaatagtgggaccaaaggctccaggggaaacttgtcatattgtga 421
Query: 179 ttgatcatggtggaaatgttccctactgggaaggacagagctatggttttattccaccag 238
||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 422 ttgatcatgatggaaatgttccctactgggaaggacagagttatggtgttattccaccag 481
>gnl|LJGI|GO012258 similar to UniRef100_Q41014 Cluster: Ferredoxin--NADP reductase,
root isozyme, chloroplast precursor; n=1; Pisum
sativum|Rep: Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor - Pisum sativum (Garden pea),
partial (56%)
Length = 732
Score = 278 bits (140), Expect = 3e-74
Identities = 190/206 (92%), Gaps = 3/206 (1%)
Strand = Plus / Plus
Query: 2 tgtcagtgccagtgcaacaagcgagtgtacccaaagtgattgtctccccattagaattgg 61
|||||||||||||||||||||||| || |||||||| | ||||||||||||||||||||
Sbjct: 232 tgtcagtgccagtgcaacaagcgactgggcccaaagttactgtctccccattagaattgg 291
Query: 62 aagctgcttcagagcctccattgaacttgcacaagcctaaacaaccatataca---acaa 118
||| ||| | |||||||| |||||||| ||||||||||||||||| |||||| ||||
Sbjct: 292 aagaagctcccgagcctcccttgaacttacacaagcctaaacaaccttatacagcaacaa 351
Query: 119 ttgtttctgttgagagaatagtgggaccaaaggctccaggggaaacttgtcatattgtga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ttgtttctgttgagagaatagtgggaccaaaggctccaggggaaacttgtcatattgtga 411
Query: 179 ttgatcatggtggaaatgttccctac 204
||||||||| ||||||||||||||||
Sbjct: 412 ttgatcatgatggaaatgttccctac 437