Miyakogusa Predicted Gene
- Lj0g3v0067909.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0067909.2 tr|A9SX66|A9SX66_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_110121,56.98,2e-18,no description,NULL; seg,NULL;
Riboflavin synthase domain-like,Riboflavin synthase-like
beta-barrel,CUFF.3229.2
(729 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78783 similar to UniRef100_Q41014 Cluster: Ferredoxin... 801 0.0
gnl|LJGI|TC76777 similar to UniRef100_Q41014 Cluster: Ferredoxin... 557 e-158
gnl|LJGI|TC60743 similar to UniRef100_Q41014 Cluster: Ferredoxin... 557 e-158
gnl|LJGI|GO012258 similar to UniRef100_Q41014 Cluster: Ferredoxi... 505 e-142
gnl|LJGI|BP062615 similar to UniRef100_Q41014 Cluster: Ferredoxi... 398 e-110
>gnl|LJGI|TC78783 similar to UniRef100_Q41014 Cluster: Ferredoxin--NADP reductase,
root isozyme, chloroplast precursor; n=1; Pisum
sativum|Rep: Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor - Pisum sativum (Garden pea),
partial (24%)
Length = 737
Score = 801 bits (404), Expect = 0.0
Identities = 489/512 (95%), Gaps = 4/512 (0%)
Strand = Plus / Plus
Query: 221 gtgtaagaagtcgtcaggtgatatgcatgtcagtgccagtgcaacaagcgagtgtaccca 280
|||||||||||| |||||||||||||||||||||||| |||| || |||||||||||||
Sbjct: 1 gtgtaagaagtcctcaggtgatatgcatgtcagtgcccgtgccaccagcgagtgtacccc 60
Query: 281 aag-tgattgtctccccattagaattggaagctgcttcagagcctccattgaacttgcac 339
||| ||||||||||||| || | |||||||| ||||||||||||||| ||||||||||||
Sbjct: 61 aagctgattgtctcccccttcgcattggaaggtgcttcagagcctcccttgaacttgcac 120
Query: 340 aagcc-taaacaaccatatacaacaattgtttctgttgagagaatagtgggaccaaaggc 398
|||| ||||| ||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 121 cagccctaaaccaccatataccaccattgtttctgttgagagaatagtgggacccaaggc 180
Query: 399 -tccaggggaaacttgtcatattgtgattgatcatggtggaaatgttccctactgggaag 457
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctccaggggaaacttgtcatattgtgattgatcatggtggaaatgttccctactgggaag 240
Query: 458 gacagagctatggttttattccaccagtaagtgacttgttattgatactcattttgtgct 517
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 241 gacagagctatggttttattccacccgtaagtgacttgttattgatactcattttgtgct 300
Query: 518 tccgctcctcattgtatctgattagtggacgtgaatccataatgattgatcttcggcttc 577
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tccgctcctccttgtatctgattagtggacgtgaatccataatgattgatcttcggcttc 360
Query: 578 agaatcttttgtcagttaatttcgatgaaaggaccccgttttggatatcttacaatatcc 637
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 361 agaatcttttgtcagttaatttcgatgaaaggaccccgttttggatatcttaccatatcc 420
Query: 638 aaccaaatgtccttcgtgttcgaagtttaatattattggtcattggtagaactttacctg 697
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacc-catgtccttcgtgttcgaagtttaatattattggtcattggtagaactttacctg 479
Query: 698 gttctgccttaccttcacattccatctgaaaa 729
||||||||||||||||||||||||||||||||
Sbjct: 480 gttctgccttaccttcacattccatctgaaaa 511
>gnl|LJGI|TC76777 similar to UniRef100_Q41014 Cluster: Ferredoxin--NADP reductase,
root isozyme, chloroplast precursor; n=1; Pisum
sativum|Rep: Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor - Pisum sativum (Garden pea),
partial (49%)
Length = 774
Score = 557 bits (281), Expect = e-158
Identities = 370/399 (92%), Gaps = 3/399 (0%)
Strand = Plus / Plus
Query: 89 agatggctgtaactgctcctgttggcagtgatttgtctatcagaagatcagggtttaagg 148
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 191 agatggctgtaactgttcctgttggcagtgatttgtctatccgaagatcagggtttaagg 250
Query: 149 catctaacttcaacttttgggataactcatgggcaccggtgtttactttggacttgaaag 208
|||||| ||||| |||| |||||| ||||||||||||| |||||||||||||||||||
Sbjct: 251 catctagcttcagctttcaggataaatcatgggcaccggcatttactttggacttgaaag 310
Query: 209 caaacagctcctgtgtaagaagtcgtcaggtgatatgcatgtcagtgccagtgcaacaag 268
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 311 caaacagctcctttgtaagaagtcgtcaggtgatatgcctgtcagtgccagtgcaacaag 370
Query: 269 cgagtgtacccaaagtgattgtctccccattagaattggaagctgcttcagagcctccat 328
||| || |||||||| | ||||||||||||||||||||||| ||| | |||||||| |
Sbjct: 371 cgactgggcccaaagttactgtctccccattagaattggaagaagctcccgagcctccct 430
Query: 329 tgaacttgcacaagcctaaacaaccatata---caacaattgtttctgttgagagaatag 385
||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 431 tgaacttacacaagcctaaacaaccttatacagcaacaattgtttctgttgagagaatag 490
Query: 386 tgggaccaaaggctccaggggaaacttgtcatattgtgattgatcatggtggaaatgttc 445
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 491 tgggaccaaaggctccaggggaaacttgtcatattgtgattgatcatgatggaaatgttc 550
Query: 446 cctactgggaaggacagagctatggttttattccaccag 484
||||||||||||||||||| |||||| ||||||||||||
Sbjct: 551 cctactgggaaggacagagttatggtgttattccaccag 589
>gnl|LJGI|TC60743 similar to UniRef100_Q41014 Cluster: Ferredoxin--NADP reductase,
root isozyme, chloroplast precursor; n=1; Pisum
sativum|Rep: Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor - Pisum sativum (Garden pea),
partial (96%)
Length = 1501
Score = 557 bits (281), Expect = e-158
Identities = 370/399 (92%), Gaps = 3/399 (0%)
Strand = Plus / Plus
Query: 89 agatggctgtaactgctcctgttggcagtgatttgtctatcagaagatcagggtttaagg 148
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 83 agatggctgtaactgttcctgttggcagtgatttgtctatccgaagatcagggtttaagg 142
Query: 149 catctaacttcaacttttgggataactcatgggcaccggtgtttactttggacttgaaag 208
|||||| ||||| |||| |||||| ||||||||||||| |||||||||||||||||||
Sbjct: 143 catctagcttcagctttcaggataaatcatgggcaccggcatttactttggacttgaaag 202
Query: 209 caaacagctcctgtgtaagaagtcgtcaggtgatatgcatgtcagtgccagtgcaacaag 268
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 203 caaacagctcctttgtaagaagtcgtcaggtgatatgcctgtcagtgccagtgcaacaag 262
Query: 269 cgagtgtacccaaagtgattgtctccccattagaattggaagctgcttcagagcctccat 328
||| || |||||||| | ||||||||||||||||||||||| ||| | |||||||| |
Sbjct: 263 cgactgggcccaaagttactgtctccccattagaattggaagaagctcccgagcctccct 322
Query: 329 tgaacttgcacaagcctaaacaaccatata---caacaattgtttctgttgagagaatag 385
||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 323 tgaacttacacaagcctaaacaaccttatacagcaacaattgtttctgttgagagaatag 382
Query: 386 tgggaccaaaggctccaggggaaacttgtcatattgtgattgatcatggtggaaatgttc 445
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 383 tgggaccaaaggctccaggggaaacttgtcatattgtgattgatcatgatggaaatgttc 442
Query: 446 cctactgggaaggacagagctatggttttattccaccag 484
||||||||||||||||||| |||||| ||||||||||||
Sbjct: 443 cctactgggaaggacagagttatggtgttattccaccag 481
>gnl|LJGI|GO012258 similar to UniRef100_Q41014 Cluster: Ferredoxin--NADP reductase,
root isozyme, chloroplast precursor; n=1; Pisum
sativum|Rep: Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor - Pisum sativum (Garden pea),
partial (56%)
Length = 732
Score = 505 bits (255), Expect = e-142
Identities = 338/365 (92%), Gaps = 3/365 (0%)
Strand = Plus / Plus
Query: 89 agatggctgtaactgctcctgttggcagtgatttgtctatcagaagatcagggtttaagg 148
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 73 agatggctgtaactgttcctgttggcagtgatttgtctatccgaagatcagggtttaagg 132
Query: 149 catctaacttcaacttttgggataactcatgggcaccggtgtttactttggacttgaaag 208
|||||| ||||| |||| |||||| ||||||||||||| |||||||||||||||||||
Sbjct: 133 catctagcttcagctttcaggataaatcatgggcaccggcatttactttggacttgaaag 192
Query: 209 caaacagctcctgtgtaagaagtcgtcaggtgatatgcatgtcagtgccagtgcaacaag 268
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 193 caaacagctcctttgtaagaagtcgtcaggtgatatgcctgtcagtgccagtgcaacaag 252
Query: 269 cgagtgtacccaaagtgattgtctccccattagaattggaagctgcttcagagcctccat 328
||| || |||||||| | ||||||||||||||||||||||| ||| | |||||||| |
Sbjct: 253 cgactgggcccaaagttactgtctccccattagaattggaagaagctcccgagcctccct 312
Query: 329 tgaacttgcacaagcctaaacaaccatata---caacaattgtttctgttgagagaatag 385
||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 313 tgaacttacacaagcctaaacaaccttatacagcaacaattgtttctgttgagagaatag 372
Query: 386 tgggaccaaaggctccaggggaaacttgtcatattgtgattgatcatggtggaaatgttc 445
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 373 tgggaccaaaggctccaggggaaacttgtcatattgtgattgatcatgatggaaatgttc 432
Query: 446 cctac 450
|||||
Sbjct: 433 cctac 437
>gnl|LJGI|BP062615 similar to UniRef100_Q41014 Cluster: Ferredoxin--NADP reductase,
root isozyme, chloroplast precursor; n=1; Pisum
sativum|Rep: Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor - Pisum sativum (Garden pea),
partial (35%)
Length = 496
Score = 398 bits (201), Expect = e-110
Identities = 201/201 (100%)
Strand = Plus / Minus
Query: 284 tgattgtctccccattagaattggaagctgcttcagagcctccattgaacttgcacaagc 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgattgtctccccattagaattggaagctgcttcagagcctccattgaacttgcacaagc 437
Query: 344 ctaaacaaccatatacaacaattgtttctgttgagagaatagtgggaccaaaggctccag 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctaaacaaccatatacaacaattgtttctgttgagagaatagtgggaccaaaggctccag 377
Query: 404 gggaaacttgtcatattgtgattgatcatggtggaaatgttccctactgggaaggacaga 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gggaaacttgtcatattgtgattgatcatggtggaaatgttccctactgggaaggacaga 317
Query: 464 gctatggttttattccaccag 484
|||||||||||||||||||||
Sbjct: 316 gctatggttttattccaccag 296