Miyakogusa Predicted Gene
- Lj0g3v0067359.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0067359.1 Non Chatacterized Hit- tr|I1KG47|I1KG47_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44670
PE,79.73,0,seg,NULL; 2-Hacid_dh,D-isomer specific 2-hydroxyacid
dehydrogenase, catalytic domain; 2-Hacid_dh_C,D,CUFF.3202.1
(921 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61416 homologue to UniRef100_A7PVL4 Cluster: Chromoso... 1812 0.0
gnl|LJGI|TC65829 homologue to UniRef100_A7P9P5 Cluster: Chromoso... 170 1e-41
gnl|LJGI|TC72200 homologue to UniRef100_A7P9P5 Cluster: Chromoso... 54 2e-06
>gnl|LJGI|TC61416 homologue to UniRef100_A7PVL4 Cluster: Chromosome chr9 scaffold_33,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_33, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 1032
Score = 1812 bits (914), Expect = 0.0
Identities = 921/922 (99%), Gaps = 1/922 (0%)
Strand = Plus / Plus
Query: 1 atggcttcctctgcttgcaccaaacccatcttcccctccaccttctcctcttcttcctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 atggcttcctctgcttgcaccaaacccatcttcccctccaccttctcctcttcttcctct 138
Query: 61 tcagaatcatccacgtccaaatcctctaacatctcattcctcagctccaccaccttcccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 tcagaatcatccacgtccaaatcctctaacatctcattcctcagctccaccaccttcccc 198
Query: 121 aagctctctcacgcttccaccaccacctcccgccactctcaacaacgttccacggtggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 aagctctctcacgcttccaccaccacctcccgccactctcaacaacgttccacggtggtc 258
Query: 181 aacgctgttttgaaaacagttgaccaaacacaaacctctgtttcaagctcaagctccaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aacgctgttttgaaaacagttgaccaaacacaaacctctgtttcaagctcaagctccaac 318
Query: 241 gatgtcggaaacctgagcctgaagcccaccatcctcgtctccgagaagctcggcgatgcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gatgtcggaaacctgagcctgaagcccaccatcctcgtctccgagaagctcggcgatgcg 378
Query: 301 gggattcaggtgctgcgcgagttcggtcacgtggaatgttcctacgacctctcgccggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gggattcaggtgctgcgcgagttcggtcacgtggaatgttcctacgacctctcgccggag 438
Query: 361 gagctctgcaagaagatctcgtcctgcgatgctctgatcgtgaggagtggcaccaaggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gagctctgcaagaagatctcgtcctgcgatgctctgatcgtgaggagtggcaccaaggtg 498
Query: 421 acgagggaggtgtttgaagcttctaaagggaggttgaaggttgtggggagagctggtgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 acgagggaggtgtttgaagcttctaaagggaggttgaaggttgtggggagagctggtgtg 558
Query: 481 ggtattgacaatgtggatctgcaagctgctactgagtttggttgccttgttgtcaatgcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ggtattgacaatgtggatctgcaagctgctactgagtttggttgccttgttgtcaatgcg 618
Query: 541 ccgacggcgaatactattgctgcggcggagcatgggatcgctcttctcgccgccatggcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ccgacggcgaatactattgctgcggcggagcatgggatcgctcttctcgccgccatggcc 678
Query: 601 cggaatgttgcacaggctgatgctgccctcaaagctggaaaatggctgagaagcaagtat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 cggaatgttgcacaggctgatgctgccctcaaagctggaaaatggctgagaagcaagtat 738
Query: 661 gtgggagtttctatggttgggaagacattagcggtgatggggtttggaaaagttggatct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gtgggagtttctatggttgggaagacattagcggtgatggggtttggaaaagttggatct 798
Query: 721 gaagtggcgaggcgtgcaaaggggcttgggatgaatgtgattgctcatgatccttatgct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gaagtggcgaggcgtgcaaaggggcttgggatgaatgtgattgctcatgatccttatgct 858
Query: 781 ccagctgatagagcccgtgcaatcggtgtggagctggtgtcatttgatcaagccatctcc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 ccagctgatagagcccgtgcaatcggtgtggagctggtgtcatttgatcaagccatctcc 918
Query: 841 actgctgatttcatctcccttcacatgccacttactccagctactaataaa-tcttcaat 899
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 919 actgctgatttcatctcccttcacatgccacttactccagctactaataaagtcttcaat 978
Query: 900 gatgagacttttgcaaagatga 921
||||||||||||||||||||||
Sbjct: 979 gatgagacttttgcaaagatga 1000
>gnl|LJGI|TC65829 homologue to UniRef100_A7P9P5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 2040
Score = 170 bits (86), Expect = 1e-41
Identities = 318/394 (80%), Gaps = 1/394 (0%)
Strand = Plus / Plus
Query: 529 gttgtcaatgcgccgacggcgaatactattgctgcggcggagcatgggatcgctcttctc 588
||||||||||| || || || || ||| ||||||| || ||||| || || || || |||
Sbjct: 483 gttgtcaatgcccccaccgccaacactgttgctgccgctgagcacggtattgccctcctc 542
Query: 589 gccgccatggcccggaatgttgcacaggctgatgctgccctcaaagctggaaaatggctg 648
|||||||||||| |||| ||||| || |||||||| | | |||||||| ||||||| |
Sbjct: 543 gccgccatggccaggaacgttgctcaagctgatgcctctgttaaagctgggaaatggcag 602
Query: 649 agaagcaagtatgtgggagtttctatggttgggaagacattagcggtgatggggtttgga 708
|||||||||||||| ||||| || ||||||||||||||| |||| ||| |||| |||||
Sbjct: 603 agaagcaagtatgttggagtgtccatggttgggaagacactagctgtgttgggatttggg 662
Query: 709 aaagttggatctgaagtggcgaggcgtgcaaaggggcttgggatgaatgtgattgctcat 768
|| ||||| |||| || || | ||||| ||||||||||| |||||||| ||||| |||
Sbjct: 663 aaggttggcactgaggttgctcgtcgtgccaaggggcttggtatgaatgtcattgcacat 722
Query: 769 gatccttatgctccagctgatagagcccgtgcaatcggtgtggagctggtgtcatttgat 828
||||||||||| || || ||| | || ||||| || ||||||||||| ||| ||||||
Sbjct: 723 gatccttatgcccctgcggatcgtgctcgtgctattggtgtggagcttgtgagctttgat 782
Query: 829 caagccatctccactgctgatttcatctcccttcacatgccacttactccagctac-taa 887
| ||| | || |||| |||||||| || || || ||||| |||||||| ||||| | |
Sbjct: 783 gaggcccttgcctctgcggatttcatttctctgcatatgcctcttactcctgctacttca 842
Query: 888 taaatcttcaatgatgagacttttgcaaagatga 921
| || ||||||||||||||||||| |||||||
Sbjct: 843 aagatgctcaatgatgagacttttgccaagatga 876
>gnl|LJGI|TC72200 homologue to UniRef100_A7P9P5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 658
Score = 54.0 bits (27), Expect = 2e-06
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 529 gttgtcaatgcgccgacggcgaatactattgctgcggcggagcatgggatcgctcttctc 588
||||||||||| || || || || ||| ||||||| || ||||| || || || || |||
Sbjct: 542 gttgtcaatgcccccaccgccaacactgttgctgccgctgagcacggtattgccctcctc 601
Query: 589 gccgccatggcccggaatgttgcacaggctgatgc 623
|||||||||||| |||| ||||| || ||||||||
Sbjct: 602 gccgccatggccaggaacgttgctcaagctgatgc 636
Score = 52.0 bits (26), Expect = 6e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 265 cccaccatcctcgtctccgagaagctcggcgatgcggg 302
|||||| |||||||| |||||||||||||||| |||||
Sbjct: 278 cccaccgtcctcgtcgccgagaagctcggcgaagcggg 315