Miyakogusa Predicted Gene

Lj0g3v0067129.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0067129.1 Non Chatacterized Hit- tr|I1JWD1|I1JWD1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,76.64,0,PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-like helical;
PPR_2,Pentatricopeptide,CUFF.3173.1
         (2236 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BF177625 similar to UniRef100_A7QUY5 Cluster: Chromosom...   535   e-151
gnl|LJGI|TC79324 UniRef100_A5I7H3 Cluster: ABC transporter, perm...    76   1e-12

>gnl|LJGI|BF177625 similar to UniRef100_A7QUY5 Cluster: Chromosome chr16 scaffold_182,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr16 scaffold_182, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (10%)
          Length = 270

 Score =  535 bits (270), Expect = e-151
 Identities = 270/270 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1518 atatagttgtgtcctgaactgctgttctcaggctctgccagttgatgagctttccaggct 1577
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    atatagttgtgtcctgaactgctgttctcaggctctgccagttgatgagctttccaggct 60

                                                                        
Query: 1578 ttttgatgagatgctacagcgtggattcgcacctaacacaattacctataatgtcatgct 1637
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ttttgatgagatgctacagcgtggattcgcacctaacacaattacctataatgtcatgct 120

                                                                        
Query: 1638 tgatgtttttggaaaagccaagcttttcaggaaggttagaaggttgtacttcatggctaa 1697
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tgatgtttttggaaaagccaagcttttcaggaaggttagaaggttgtacttcatggctaa 180

                                                                        
Query: 1698 gaaacaaggtctggttgatgtgatcacttacaatacaataatagctgcatatgggaaaaa 1757
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gaaacaaggtctggttgatgtgatcacttacaatacaataatagctgcatatgggaaaaa 240

                                          
Query: 1758 taaagacttcaagaacatgtcatcaactgt 1787
            ||||||||||||||||||||||||||||||
Sbjct: 241  taaagacttcaagaacatgtcatcaactgt 270


>gnl|LJGI|TC79324 UniRef100_A5I7H3 Cluster: ABC transporter, permease protein; n=2;
            Clostridium botulinum A|Rep: ABC transporter, permease
            protein - Clostridium botulinum (strain Hall / ATCC 3502
            / NCTC 13319 / Type A), partial (5%)
          Length = 869

 Score = 75.8 bits (38), Expect = 1e-12
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                      
Query: 1982 aagtcggtggcgtgcttgcagaattgaaagaatatggtctga 2023
            ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 36   aagtcggtgacgtgcttgcagaattgaaagaatatggtctga 77