Miyakogusa Predicted Gene

Lj0g3v0067009.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0067009.1 tr|G7K3B3|G7K3B3_MEDTR CCP OS=Medicago truncatula
GN=MTR_5g090940 PE=4 SV=1,57.63,0.000000007, ,CUFF.3161.1
         (252 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82666                                                      111   2e-24
gnl|LJGI|GO014712                                                      52   2e-06

>gnl|LJGI|TC82666 
          Length = 710

 Score =  111 bits (56), Expect = 2e-24
 Identities = 72/76 (94%), Gaps = 1/76 (1%)
 Strand = Plus / Minus

                                                                       
Query: 151 ctttatgatgctgagattgaatccttccagaactcacaagagtctcatgatctgatgagt 210
           |||||||||||||||||||||  |||||||||||| |||||||||||| |||||||||||
Sbjct: 127 ctttatgatgctgagattgaagtcttccagaactc-caagagtctcatcatctgatgagt 69

                           
Query: 211 gcaacgtacttgaatg 226
           ||||||||||||||||
Sbjct: 68  gcaacgtacttgaatg 53



 Score = 69.9 bits (35), Expect = 7e-12
 Identities = 54/59 (91%), Gaps = 1/59 (1%)
 Strand = Plus / Minus

                                                                     
Query: 13 tacttgaatggacaaagggatggagtcctcaaagcacatgacatcttgcttgctctgga 71
          ||||||||||||| | |||||||||||||| ||||||||| ||||||| ||||||||||
Sbjct: 62 tacttgaatggacta-gggatggagtcctcgaagcacatgccatcttgtttgctctgga 5


>gnl|LJGI|GO014712 
          Length = 219

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 28  agggatggagtcctcaaagcacatgacatcttgcttgctctggaggacatggacaaag 85
           ||||||||||||||  |||||| || | | ||||||||| |||| |||||||||||||
Sbjct: 149 agggatggagtccttgaagcacctgccctattgcttgctttggatgacatggacaaag 92



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 46/52 (88%), Gaps = 3/52 (5%)
 Strand = Plus / Minus

                                                               
Query: 165 gattgaatccttccagaactcacaagagtc---tcatgatctgatgagtgca 213
           ||||||| |||||||||| |||||||||||   ||||||| |||||||||||
Sbjct: 219 gattgaagccttccagaaatcacaagagtccgatcatgatttgatgagtgca 168