Miyakogusa Predicted Gene

Lj0g3v0066429.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0066429.2 tr|D5C1T7|D5C1T7_NITHN Transaldolase
OS=Nitrosococcus halophilus (strain Nc4) GN=Nhal_1585 PE=3
SV=1,48.81,2e-16,no description,Aldolase-type TIM barrel;
Transaldolase,Transaldolase; Aldolase,NULL,CUFF.3123.2
         (300 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62952 similar to UniRef100_A7QT89 Cluster: Chromosome...   490   e-138

>gnl|LJGI|TC62952 similar to UniRef100_A7QT89 Cluster: Chromosome chr1 scaffold_166,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_166, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (40%)
          Length = 857

 Score =  490 bits (247), Expect = e-138
 Identities = 286/298 (95%), Gaps = 2/298 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gggcctcaataaatgtgaagaatccagcttaccctgatacttcttatgttgaatctctta 64
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 gggcctcaacaaatgtgaagaatccagcttaccctgatacttcttatgttgaatctctta 295

                                                                       
Query: 65  ttggaccagatacgatttcaaccatgccaagtcaagcttttcaagcattcatggaccatg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ttggaccagatacgatttcaaccatgccaagtcaagcttttcaagcattcatggaccatg 355

                                                                       
Query: 125 gtgttctttcaagaaccattgatacaaaagtatcagaggcccaaggcatttacaatgcaa 184
           ||||||||||||||||||||||| |||| || ||||||||||||||||||||| ||||||
Sbjct: 356 gtgttctttcaagaaccattgatgcaaatgtttcagaggcccaaggcatttacgatgcaa 415

                                                                       
Query: 185 ttgagaagttggggattgattggaatgctgttggatcacaactggaacatgaggtgatag 244
           |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 416 ttgagaggttggggattgattggaatgctgttggatcacagctggaacatgaggtgctag 475

                                                                     
Query: 245 attcattcacaaaaagctt--acaatgtgattcaatacctgcaaaagaaggctaaatc 300
           |||||||||||||||||||  |||||||| |||||| |||||||||||||||||||||
Sbjct: 476 attcattcacaaaaagctttgacaatgtgcttcaatgcctgcaaaagaaggctaaatc 533