Miyakogusa Predicted Gene

Lj0g3v0066309.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0066309.1 Non Chatacterized Hit- tr|G7JR32|G7JR32_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,63.41,1e-17,seg,NULL,CUFF.3103.1
         (241 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65430                                                      470   e-132
gnl|LJGI|TC78831                                                       96   1e-19

>gnl|LJGI|TC65430 
          Length = 681

 Score =  470 bits (237), Expect = e-132
 Identities = 240/241 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggagccaagaggtcttcatcatgctcatttagcagcatgttcaaggcctgtttctca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 atgggagccaagaggtcttcatcatgctcatttagcagcatgttcaaggcctgtttctca 197

                                                                       
Query: 61  agcggaaaccagtatgataactactgggaaggcagcggcaccggccggagaatgtttgca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 agcggaaaccagtatgataactactgggaaggcagcggcaccggccggagaatgtttgca 257

                                                                       
Query: 121 agtgatgaagacagaggttattgggttgcagagcctggtattgacagaaaagcctctgac 180
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 258 agtgatgaagacagaggttattgggttgcagagcctggtattgacggaaaagcctctgac 317

                                                                       
Query: 181 ttcattgctagatactatgccaaccgagtcactgactctgagcgccaatttgcttcttga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ttcattgctagatactatgccaaccgagtcactgactctgagcgccaatttgcttcttga 377

            
Query: 241 a 241
           |
Sbjct: 378 a 378


>gnl|LJGI|TC78831 
          Length = 624

 Score = 95.6 bits (48), Expect = 1e-19
 Identities = 110/130 (84%), Gaps = 3/130 (2%)
 Strand = Plus / Plus

                                                                       
Query: 115 tttgcaagtgatgaagacagaggtt---attgggttgcagagcctggtattgacagaaaa 171
           ||||| |||||||||||||||||     |||||||||  ||||||||||||||||  |||
Sbjct: 271 tttgctagtgatgaagacagaggaaggaattgggttggtgagcctggtattgacaagaaa 330

                                                                       
Query: 172 gcctctgacttcattgctagatactatgccaaccgagtcactgactctgagcgccaattt 231
           |||||||  ||||||||||||| |||||||| | ||| ||||||||||||||  ||| ||
Sbjct: 331 gcctctgctttcattgctagattctatgccaccagaggcactgactctgagcaacaaatt 390

                     
Query: 232 gcttcttgaa 241
           || |||||||
Sbjct: 391 gcatcttgaa 400