Miyakogusa Predicted Gene

Lj0g3v0066299.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0066299.2 tr|A9RHM9|A9RHM9_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,48.39,4e-17,unchar_dom_1: uncharacterized domain
1,Phenylacetic acid degradation-related domain; no
description,,CUFF.3109.2
         (387 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67302 similar to UniRef100_A7NW05 Cluster: Chromosome...   759   0.0  

>gnl|LJGI|TC67302 similar to UniRef100_A7NW05 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (87%)
          Length = 1661

 Score =  759 bits (383), Expect = 0.0
 Identities = 386/387 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagacaagccatcatcatcatcattggcaacatcaaagactgcagctttggatacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  atggaagacaagccatcatcatcatcattggcaacatcaaagactgcagctttggatacc 120

                                                                       
Query: 61  cctcttcatgcaattggatttgagattgaagaattatcaccacagagagttactggtcgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cctcttcatgcaattggatttgagattgaagaattatcaccacagagagttactggtcgt 180

                                                                       
Query: 121 ctccctattaccctcaagtgctgccagccatttaaggttcttcatggaggggtatcagca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctccctattaccctcaagtgctgccagccatttaaggttcttcatggaggggtatcagca 240

                                                                       
Query: 181 atgatagcagagtctcttgcaagcatgggagcccacatggcttctggttatcaaagagtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgatagcagagtctcttgcaagcatgggagcccacatggcttctggttatcaaagagtg 300

                                                                       
Query: 241 gctggaattcaactcagcatcaaccatttgaaacgagcagagcttggtgacttggtccat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctggaattcaactcagcatcaaccatttgaaacgagcagagcttggtgacttggtccat 360

                                                                       
Query: 301 gctgaagctacccctttaaatgttggcaaaaccgttcaggtgtgggaggtaacaatctgg 360
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctgaagctacctctttaaatgttggcaaaaccgttcaggtgtgggaggtaacaatctgg 420

                                      
Query: 361 aagattgatccttcaaacttacagaac 387
           |||||||||||||||||||||||||||
Sbjct: 421 aagattgatccttcaaacttacagaac 447