Miyakogusa Predicted Gene
- Lj0g3v0066219.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0066219.1 Non Chatacterized Hit- tr|B9RUV8|B9RUV8_RICCO
ATP-dependent transporter, putative OS=Ricinus
communi,88.59,0,seg,NULL; no description,NULL; ABC_tran,ABC
transporter-like; ATP-BINDING CASSETTE, SUB-FAMILY F (GC,CUFF.3097.1
(1584 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW596165 similar to UniRef100_Q65CB1 Cluster: ABC trans... 930 0.0
gnl|LJGI|BW627169 similar to UniRef100_Q65CB1 Cluster: ABC trans... 751 0.0
gnl|LJGI|TC71595 homologue to UniRef100_Q65CB1 Cluster: ABC tran... 726 0.0
>gnl|LJGI|BW596165 similar to UniRef100_Q65CB1 Cluster: ABC transporter; n=1; Populus
tremula x Populus tremuloides|Rep: ABC transporter -
Populus tremula x Populus tremuloides, partial (21%)
Length = 480
Score = 930 bits (469), Expect = 0.0
Identities = 475/477 (99%)
Strand = Plus / Plus
Query: 579 tgatttgaagcttcatctctatcgtggaaactttgatgattttgagagtgggtatgaaca 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tgatttgaagcttcatctctatcgtggaaactttgatgattttgagagtgggtatgaaca 63
Query: 639 gcgtcgtaaagagattaataagaagtatgagatttatgacaagcaaatgaaagcggctaa 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gcgtcgtaaagagattaataagaagtatgagatttatgacaagcaaatgaaagcggctaa 123
Query: 699 aaggagtggaaaccgggctcaacaagaaaaggtgaaggatcgagctaagtttgcagcagc 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aaggagtggaaaccgggctcaacaagaaaaggtgaaggatcgagctaagtttgcagcagc 183
Query: 759 taaggaagcatctaaaaacaagggtaagggcaagggcaaggttgatgaggatgagatcgc 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 taaggaagcatctaaaaacaagggtaagggcaagggcaaggttgatgaggatgagatcgc 243
Query: 819 accagaggcaccacagaaatggagggattacagtgttgagttccactttcttgaacctac 878
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 244 accagaggcaccacagaaatggagggattacagtgttgagttccactttcctgaacctac 303
Query: 879 tgagctcacacctccacttattcagcttattgaagtgagcttcagctacccaaaccgaga 938
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tgagctcacacctccacttatgcagcttattgaagtgagcttcagctacccaaaccgaga 363
Query: 939 tgatttcagactctcaaatgttgatgttggcattgatatggggactcgtgttgccattgt 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tgatttcagactctcaaatgttgatgttggcattgatatggggactcgtgttgccattgt 423
Query: 999 tgggcctaacggagctggaaaatctacactgctaaatcttctggctggtgatttggt 1055
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tgggcctaacggagctggaaaatctacactgctaaatcttctggctggtgatttggt 480
>gnl|LJGI|BW627169 similar to UniRef100_Q65CB1 Cluster: ABC transporter; n=1; Populus
tremula x Populus tremuloides|Rep: ABC transporter -
Populus tremula x Populus tremuloides, partial (19%)
Length = 459
Score = 751 bits (379), Expect = 0.0
Identities = 379/379 (100%)
Strand = Plus / Plus
Query: 1 atgggcaagtccacactattgaagcttcttgcttggaggaagataccagtacctaaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atgggcaagtccacactattgaagcttcttgcttggaggaagataccagtacctaaaaat 140
Query: 61 atcgatgtccttctggttgagcaggagatagttggggatgataaaacagcacttgaagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 atcgatgtccttctggttgagcaggagatagttggggatgataaaacagcacttgaagct 200
Query: 121 gttgtttcagctaatgttgaacttgttaatgttcgacaagaagttgctgctctcacaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttgtttcagctaatgttgaacttgttaatgttcgacaagaagttgctgctctcacaaat 260
Query: 181 gcagcttctgttgaggaaagtgtagataaagataataatttggaggaagatgaagcagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagcttctgttgaggaaagtgtagataaagataataatttggaggaagatgaagcagga 320
Query: 241 gaaaagttagcagagctgtatgaaaaattgcagctgatggggtctgatgctgctgaatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaaagttagcagagctgtatgaaaaattgcagctgatggggtctgatgctgctgaatct 380
Query: 301 caggcatcaaagatattagctggtttgggttttacaaaggatatgcagggccgtcctaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggcatcaaagatattagctggtttgggttttacaaaggatatgcagggccgtcctaca 440
Query: 361 aaatcctttagcggtggct 379
|||||||||||||||||||
Sbjct: 441 aaatcctttagcggtggct 459
>gnl|LJGI|TC71595 homologue to UniRef100_Q65CB1 Cluster: ABC transporter; n=1; Populus
tremula x Populus tremuloides|Rep: ABC transporter -
Populus tremula x Populus tremuloides, partial (17%)
Length = 822
Score = 726 bits (366), Expect = 0.0
Identities = 369/370 (99%)
Strand = Plus / Plus
Query: 1215 aaagcttggtaagtttgggctgcctagtcataaccatcttacccctattgtgaaactatc 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaagcttggtaagtttgggctgcctagtcataaccatcttacccctattgtgaaactatc 60
Query: 1275 aggagggcaaaaagctcgggtggtcttcacgtcgatatccatgtcaaaacctcacatttt 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggagggcaaaaagctcgggtggtcttcacgtcgatatccatgtcaaaacctcacatttt 120
Query: 1335 attgttagatgaacccacaaatcatctggatatgcaaagtattgatgcattggctgatgc 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attgttagatgaacccacaaatcatctggatatgcaaagtattgatgcattggctgatgc 180
Query: 1395 attggatgaattcactggaggagttgttcttgttagtcatgattcaagattgatatcacg 1454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attggatgaattcactggaggagttgttcttgttagtcatgattcaagattgatatcacg 240
Query: 1455 tgtttgtgacgatgaagaaaggagtcaaatatggattgttgaggatggcactgtcagaaa 1514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtttgtgacgatgaagaaaggagtcaaatatggattgttgaggatggcactgtcagaaa 300
Query: 1515 tttccctggaacatttgaggattacaaggatgatttgcttaaagagattaaagctgaagt 1574
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 301 tttccctggaacatttgaggattacaaggatgatttgctgaaagagattaaagctgaagt 360
Query: 1575 tgatgattaa 1584
||||||||||
Sbjct: 361 tgatgattaa 370