Miyakogusa Predicted Gene

Lj0g3v0065769.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0065769.1 tr|D8TT90|D8TT90_VOLCA Inner membrane
ALBINO3-like protein 2, chloroplast (Fragment) OS=Volvox
carte,57.75,3e-17,INNER MEMBRANE ALBINO3-LIKE PROTEIN 1, 2,
CHLOROPLAST,NULL; OXA1,Membrane insertase OXA1/ALB3/YidC; ,CUFF.3066.1
         (558 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63687 similar to UniRef100_A7P455 Cluster: Chromosome...   553   e-157

>gnl|LJGI|TC63687 similar to UniRef100_A7P455 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (32%)
          Length = 763

 Score =  553 bits (279), Expect = e-157
 Identities = 282/283 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccgctttgttaccttgcgtgcccagcttagtctccgttccgttcgggaacaactgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 atggccgctttgttaccttgcgtgcccagcttagtctccgttccgttcgggaacaactgg 213

                                                                       
Query: 61  agcagaacccatctaccacaccgacctcactccttctccggttcgaccaggcacttcctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 agcagaacccatctaccacaccgacctcactccttctccggttcgaccaggcacttcctt 273

                                                                       
Query: 121 cgcggttcgctctccgtagcccggttcggtctcaaacccggtttcttgcccgacccggac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 cgcggttcgctctccgtagcccggttcggtctcaaacccggtttcttgcccgacccggac 333

                                                                       
Query: 181 gccgccgccgcagccgaaggcgttatcagagagctgttcacccgagcggagggttttctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gccgccgccgcagccgaaggcgttatcagagagctgttcacccgagcggagggttttctt 393

                                                      
Query: 241 tacacggttgccgatgccgccgttccttcttccgacacggcgg 283
           |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 394 tacacggttgccgatgccgccgtttcttcttccgacacggcgg 436



 Score =  434 bits (219), Expect = e-121
 Identities = 233/240 (97%)
 Strand = Plus / Plus

                                                                       
Query: 316 cagaacaacgattggttctctggaatcgccaattacatggaaaccgttctcaagatactc 375
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 cagaacaacgattggttctctggaatcgccaattacatggaaaccgttctcaagatactc 525

                                                                       
Query: 376 aaggatggactttcttctgtacatgtgccatatgcttatggttttgcaattatacttctc 435
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 aaggatggactttcttctgtacatgtgccatatgcttatggttttgcaattatacttctc 585

                                                                       
Query: 436 acggttctcgtaaaagctgccacatttccattgacnnnnnnncaggttgaatctgccatg 495
           |||||||||||||||||||||||||||||||||||       ||||||||||||||||||
Sbjct: 586 acggttctcgtaaaagctgccacatttccattgacaaaaaaacaggttgaatctgccatg 645

                                                                       
Query: 496 gctatgcgaactttgcaaccacaaataaaagctatccagcaacggtatgctggtgatcag 555
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gctatgcgaactttgcaaccacaaataaaagctatccagcaacggtatgctggtgatcag 705