Miyakogusa Predicted Gene

Lj0g3v0065659.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0065659.1 Non Chatacterized Hit- tr|B8BBH4|B8BBH4_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,32.46,0.0000001,Leucine-rich repeat - CC
(cysteine-containin,Leucine-rich repeat, cysteine-containing subtype;
RNI-l,gene.g4725.t1.1
         (759 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63939 similar to UniRef100_Q2HSK3 Cluster: Cyclin-lik...    90   2e-17
gnl|LJGI|TC82289 weakly similar to UniRef100_Q2HSK3 Cluster: Cyc...    74   1e-12
gnl|LJGI|TC70271 weakly similar to UniRef100_Q2HSK3 Cluster: Cyc...    74   1e-12

>gnl|LJGI|TC63939 similar to UniRef100_Q2HSK3 Cluster: Cyclin-like F-box; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box - Medicago
           truncatula (Barrel medic), partial (37%)
          Length = 840

 Score = 89.7 bits (45), Expect = 2e-17
 Identities = 132/161 (81%)
 Strand = Plus / Plus

                                                                       
Query: 580 ctacagattattgataacactatcagtaatgttggcttgcttgccattctcaatggttgc 639
           ||||||||||| |  |||| | ||||||||| |||||||||||| |||||  ||||||||
Sbjct: 363 ctacagattatgggaaacagtctcagtaatgatggcttgcttgctattcttgatggttgc 422

                                                                       
Query: 640 cctctgctagaatttcttgacctccgatgctgtgaatttcttgatttgagtggtagctta 699
           ||||| || |||| ||||||||| | | | |||   ||| |||||||||||||||| || 
Sbjct: 423 cctcttctcgaatatcttgacctacaaggttgtccttttgttgatttgagtggtagtttg 482

                                                    
Query: 700 gggaaaaagtgtcgtgagcagatcaaacatttactgcttcc 740
           |  || | ||||| ||||||||||||| |||||| ||||||
Sbjct: 483 gaaaagaggtgtcatgagcagatcaaatatttacggcttcc 523


>gnl|LJGI|TC82289 weakly similar to UniRef100_Q2HSK3 Cluster: Cyclin-like F-box; n=1;
            Medicago truncatula|Rep: Cyclin-like F-box - Medicago
            truncatula (Barrel medic), partial (50%)
          Length = 1365

 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 93/111 (83%), Gaps = 3/111 (2%)
 Strand = Plus / Plus

                                                                        
Query: 391  aagtttccattattagaggagcttgacatttcatattcaagcaacctaactaaagattct 450
            ||||||||| | ||||| ||||||||||||||||||   ||||| |||||||| ||||||
Sbjct: 1175 aagtttccagtgttagaagagcttgacatttcatat---agcaatctaactaaggattct 1231

                                                               
Query: 451  cttgaagaaattggccggtgttgtccttttttgaaaacattaaaatttaac 501
            ||  |||  ||| |||| ||||| |||  ||||||| ||||||||||||||
Sbjct: 1232 ctgaaagctatttgccgatgttgccctcatttgaaagcattaaaatttaac 1282



 Score = 60.0 bits (30), Expect = 2e-08
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 97  gaaattgtgacgcgtgcaagtctagtgtgccctttatggtggaacatttgcaaggaccct 156
           |||||||||||  ||||||| | ||||||| |||| |||||||||||||| ||||| || 
Sbjct: 878 gaaattgtgacaagtgcaagcccagtgtgctctttgtggtggaacatttgtaaggatcca 937

                         
Query: 157 ctcatttggcgcac 170
           ||||| ||| ||||
Sbjct: 938 ctcatgtggtgcac 951


>gnl|LJGI|TC70271 weakly similar to UniRef100_Q2HSK3 Cluster: Cyclin-like F-box; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box - Medicago
           truncatula (Barrel medic), partial (28%)
          Length = 823

 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 93/111 (83%), Gaps = 3/111 (2%)
 Strand = Plus / Plus

                                                                       
Query: 391 aagtttccattattagaggagcttgacatttcatattcaagcaacctaactaaagattct 450
           ||||||||| | ||||| ||||||||||||||||||   ||||| |||||||| ||||||
Sbjct: 169 aagtttccagtgttagaagagcttgacatttcatat---agcaatctaactaaggattct 225

                                                              
Query: 451 cttgaagaaattggccggtgttgtccttttttgaaaacattaaaatttaac 501
           ||  |||  ||| |||| ||||| |||  ||||||| ||||||||||||||
Sbjct: 226 ctgaaagctatttgccgatgttgccctcatttgaaagcattaaaatttaac 276