Miyakogusa Predicted Gene
- Lj0g3v0065459.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0065459.1 Non Chatacterized Hit- tr|B9RCL7|B9RCL7_RICCO
Atpob1, putative OS=Ricinus communis GN=RCOM_1689910
P,53.61,5e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
BACK,BTB/Kelch-associated,gene.g4716.t1.1
(552 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78370 similar to UniRef100_O82343 Cluster: Expressed ... 119 2e-26
gnl|LJGI|TC59295 similar to UniRef100_A7PZQ8 Cluster: Chromosome... 111 5e-24
gnl|LJGI|FS326466 similar to UniRef100_O82343 Cluster: Expressed... 80 2e-14
gnl|LJGI|TC59597 similar to UniRef100_O82343 Cluster: Expressed ... 76 3e-13
gnl|LJGI|FS358394 weakly similar to UniRef100_A7PZQ8 Cluster: Ch... 70 2e-11
gnl|LJGI|BP043548 weakly similar to UniRef100_Q0DBY3 Cluster: Os... 68 6e-11
gnl|LJGI|FS361599 weakly similar to UniRef100_O82343 Cluster: Ex... 60 2e-08
gnl|LJGI|TC71109 similar to UniRef100_A7PZQ8 Cluster: Chromosome... 54 9e-07
gnl|LJGI|TC68507 similar to UniRef100_O82343 Cluster: Expressed ... 52 4e-06
>gnl|LJGI|TC78370 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (43%)
Length = 1014
Score = 119 bits (60), Expect = 2e-26
Identities = 150/180 (83%)
Strand = Plus / Plus
Query: 1 atggccttgcctcttcatgaaatagaggcaatcttggctagtgatgatctcaaggttcaa 60
||||||||||||||| || |||||||||||||||||||||||||||||| ||||| |
Sbjct: 677 atggccttgcctctttctgggatagaggcaatcttggctagtgatgatctccaggttgca 736
Query: 61 tcagaagttgttgtatgtggctttgtattaaattgggctagaaaacattacaacaaatta 120
||||| | || ||||| || ||||| |||||| ||||||||| || | ||||| | |
Sbjct: 737 tcagatgatgatgtatatgactttgcattaaactgggctagacaaaagtacaagagtctg 796
Query: 121 gaagaaaggcgagaagttctgggtacacagcttgcgcgttatattcgcttcccttgtatg 180
||||||||||| |||||| ||||||||| |||| ||||| ||||||||||||| ||||
Sbjct: 797 gaagaaaggcgtgaagttttgggtacacgacttgtgcgtttaattcgcttcccttatatg 856
>gnl|LJGI|TC59295 similar to UniRef100_A7PZQ8 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 1623
Score = 111 bits (56), Expect = 5e-24
Identities = 134/160 (83%)
Strand = Plus / Plus
Query: 21 aatagaggcaatcttggctagtgatgatctcaaggttcaatcagaagttgttgtatgtgg 80
|||||||| ||| |||||||||||| ||||| |||| ||||||||| || ||||| ||
Sbjct: 663 aatagaggtaattttggctagtgatcatctccgggttaaatcagaagatgatgtatatga 722
Query: 81 ctttgtattaaattgggctagaaaacattacaacaaattagaagaaaggcgagaagttct 140
|||||||||||| ||||||||| | |||||||| | | | |||||||||||||||||
Sbjct: 723 ctttgtattaaagtgggctagacagcattacaaaagacggaaggaaaggcgagaagttct 782
Query: 141 gggtacacagcttgcgcgttatattcgcttcccttgtatg 180
|||||||| |||| ||||| ||||||||||||| ||||
Sbjct: 783 gggtacacgacttgggcgtttaattcgcttcccttatatg 822
Score = 73.8 bits (37), Expect = 1e-12
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 411 ccatgatacatttactagggggaagtttattggtcatagaaacttgtttaatatgccatg 470
|||| ||||||||||| |||||| |||| ||||| | ||||||||||||| | ||||
Sbjct: 1278 ccattatacatttactggggggacgtttgttggtactggaaacttgtttaaggttacatg 1337
Query: 471 gacttccttcatggctgaggattgtaatttcttcattaacggtgttctccacc 523
| || ||||||||||||||| || ||| ||||||||||||||||||||||
Sbjct: 1338 gtctaaattcatggctgaggatagtccttttttcattaacggtgttctccacc 1390
>gnl|LJGI|FS326466 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (16%)
Length = 691
Score = 79.8 bits (40), Expect = 2e-14
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 1 atggccttgcctcttcatgaaatagaggcaatcttggctagtgatgatctcaaggttcaa 60
||||||||||||||| || |||||||||||||||||||||||||||||| | ||| ||
Sbjct: 517 atggccttgcctctttctggcatagaggcaatcttggctagtgatgatctccatgttgaa 576
Query: 61 tcagaagttgttgtatgtggctttgtattaaattgggctagaaaacattacaacaa 116
||| ||| || | ||| || |||||||||| | |||||| || |||||||||||
Sbjct: 577 tcacaagatgctttatatgactttgtattacagtgggctggacgtcattacaacaa 632
>gnl|LJGI|TC59597 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (23%)
Length = 792
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 2 tggccttgcctcttcatgaaatagaggcaatcttggctagtgatgatctcaaggttcaat 61
||||||||||||| || ||||||||||||||||||||||||||||||| |||| |||
Sbjct: 702 tggccttgcctctctctggaatagaggcaatcttggctagtgatgatctcgtggttgaat 761
Query: 62 cagaag 67
||||||
Sbjct: 762 cagaag 767
>gnl|LJGI|FS358394 weakly similar to UniRef100_A7PZQ8 Cluster: Chromosome chr15
scaffold_40, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_40, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (40%)
Length = 712
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 122 aagaaaggcgagaagttctgggtacacagcttgcgcgttatattcgcttcccttgtatg 180
||||||||||||||||||||||||||| |||||| ||| ||||||||||||| ||||
Sbjct: 667 aagaaaggcgagaagttctgggtacacgacttgcgggtttaattcgcttcccttatatg 609
>gnl|LJGI|BP043548 weakly similar to UniRef100_Q0DBY3 Cluster: Os06g0507400 protein;
n=2; Oryza sativa Japonica Group|Rep: Os06g0507400
protein - Oryza sativa subsp. japonica (Rice), partial
(6%)
Length = 509
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 466 ccatggacttccttcatggctgaggattgtaatttcttcattaacg 511
||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 78 ccatggacttccttcatggctaaggattgtcttttcttcattaacg 33
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 466 ccatggacttccttcatggctgaggattgtaatttcttcattaacggtgttctcca 521
||||||| ||| ||||||||||||||| | |||||||||||| |||||||||||
Sbjct: 434 ccatggaattcgttcatggctgaggataatcgtttcttcattaaaggtgttctcca 379
>gnl|LJGI|FS361599 weakly similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (31%)
Length = 752
Score = 60.0 bits (30), Expect = 2e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 466 ccatggacttccttcatggctgaggattgtaatttcttcattaacggtgttctccacc 523
||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||||
Sbjct: 154 ccatggacttcattcattgctgaggatagtcttttcttcattaacgacgttctccacc 97
>gnl|LJGI|TC71109 similar to UniRef100_A7PZQ8 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 709
Score = 54.0 bits (27), Expect = 9e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 281 gtgtggtgtactgggatttgaagcgggaggtgtgtgccactttgttaccat 331
|||||||||||| ||| ||||||| |||| ||||||||||||||| ||||
Sbjct: 87 gtgtggtgtacttggagctgaagcgagaggagtgtgccactttgttcccat 137
>gnl|LJGI|TC68507 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (30%)
Length = 710
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 446 atagaaacttgtttaatatgccatggacttccttcatggctgaggattgtaatttcttca 505
|||||||||||||| || ||||||||||| ||||| | ||||||| | | ||||||||
Sbjct: 434 atagaaacttgtttggaattccatggacttcgttcattggtgaggatagcattttcttca 493
Query: 506 ttaacggtgttctc 519
|||| | |||||||
Sbjct: 494 ttaaggatgttctc 507