Miyakogusa Predicted Gene

Lj0g3v0064989.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0064989.1 Non Chatacterized Hit- tr|C6T6L6|C6T6L6_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,38.38,2e-17,coiled-coil,NULL; seg,NULL; DUF688,Protein of unknown
function DUF688,CUFF.3010.1
         (1866 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67668                                                       78   2e-13
gnl|LJGI|FS323658 similar to UniRef100_A7PJH8 Cluster: Chromosom...    62   1e-08

>gnl|LJGI|TC67668 
          Length = 687

 Score = 77.8 bits (39), Expect = 2e-13
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1646 ttcctcttgttcttccttcactaaaagctccatcagagtcttggcttaagcgaaccttac 1705
            |||||||||  ||||||| ||  |||||||| |||||||||||||||||||| || ||||
Sbjct: 538  ttcctcttgcccttcctttaccgaaagctccttcagagtcttggcttaagcgtactttac 597

                               
Query: 1706 ctaccatttcctcaaggaa 1724
            ||||  |||||||||||||
Sbjct: 598  ctacagtttcctcaaggaa 616


>gnl|LJGI|FS323658 similar to UniRef100_A7PJH8 Cluster: Chromosome chr12 scaffold_18,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_18, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (45%)
          Length = 761

 Score = 61.9 bits (31), Expect = 1e-08
 Identities = 91/111 (81%)
 Strand = Plus / Plus

                                                                       
Query: 114 tcttcctgcatacaaatcagagttgaagtcaggtccagagagggatgctggaaaagttcc 173
           ||||||| | |||||||||||||| || |||||||||| |||  |  | |||| ||||||
Sbjct: 172 tcttcctacttacaaatcagagttaaaatcaggtccagtgagtaacccgggaacagttcc 231

                                                              
Query: 174 ctttgtgtgggagaaaactccaggaagaccaaaagatgaaaccaaattaca 224
            || | |||||||| |||||| |||||||| ||  |||||| |||||||||
Sbjct: 232 tttcgagtgggagagaactcctggaagacctaagaatgaaagcaaattaca 282