Miyakogusa Predicted Gene
- Lj0g3v0064839.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0064839.1 Non Chatacterized Hit- tr|I1MBB4|I1MBB4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,52.17,0,seg,NULL;
Ankyrin repeat,Ankyrin repeat-containing domain; CCCH zinc
finger,NULL; Ank_2,Ankyrin repe,CUFF.2995.1
(1617 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62722 similar to UniRef100_Q0GIK4 Cluster: Cys-3-His ... 252 6e-66
gnl|LJGI|FS339979 similar to UniRef100_A7NYE3 Cluster: Chromosom... 240 2e-62
gnl|LJGI|TC78964 similar to UniRef100_Q0GIK4 Cluster: Cys-3-His ... 94 3e-18
gnl|LJGI|TC77111 similar to UniRef100_A7NYE3 Cluster: Chromosome... 70 5e-11
gnl|LJGI|BP083473 UniRef100_A7Q2A5 Cluster: Chromosome chr13 sca... 58 2e-07
gnl|LJGI|BP063686 homologue to UniRef100_A2Q3L5 Cluster: Zinc fi... 58 2e-07
>gnl|LJGI|TC62722 similar to UniRef100_Q0GIK4 Cluster: Cys-3-His zinc finger protein;
n=1; Capsicum annuum|Rep: Cys-3-His zinc finger protein -
Capsicum annuum (Bell pepper), partial (41%)
Length = 1242
Score = 252 bits (127), Expect = 6e-66
Identities = 328/395 (83%)
Strand = Plus / Plus
Query: 544 aaagattaccctgctgatccctcttttcctgacataaggaatgggatatatggaactgat 603
|||||||| |||||||||| ||| |||| ||||| | |||||||||||||||||| |||
Sbjct: 760 aaagattatcctgctgatctctcccttccggacatcaagaatgggatatatggaaccgat 819
Query: 604 gagtttagaatgttcacattcaaggtgaaaccttgttcaagggcttattctcatgattgg 663
|||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 820 gagtttaggatgtatgtgttcaaagtgaaaccttgttcaagggcttattctcatgattgg 879
Query: 664 actgagtgcccctttgttcatcctggtgaaaacgcgaggcgtcgcgatccaaggaagtat 723
|||||||||||||||||||| || || || || || ||||| || ||||||||||| |||
Sbjct: 880 actgagtgcccctttgttcacccgggggagaatgcaaggcggcgtgatccaaggaaatat 939
Query: 724 cattatagctgtgtcccttgccctgagttcaagaaaggaccctgcatcaaaggggattct 783
| ||||||||| |||||||| |||||||| ||||||| |||||| || ||| || |
Sbjct: 940 ccttatagctgcgtcccttgtcctgagtttcggaaaggatcctgcagcagaggcgacgcc 999
Query: 784 tgtgaatatgcacatggtgtgtttgagagttggcttcacccagctcagtatagaacccgg 843
||||| |||||||||||| | |||||| | ||||||||||| || |||||| | || |||
Sbjct: 1000 tgtgagtatgcacatggtatttttgagtgctggcttcaccctgcccagtatcggacgcgg 1059
Query: 844 ttatgcaaggatgaaactggatgcacacgaaatgtttgcttttttgcccacaagaaggag 903
| |||||||| || | |||||| | | || ||||| ||||| |||||| ||||
Sbjct: 1060 ctctgcaaggaggagagaacatgcactaggagagtgtgcttctttgctcacaagctggag 1119
Query: 904 gagcttcgccccttgtatgcttctactggttctgc 938
||||||||||||||||||| ||| |||||||||||
Sbjct: 1120 gagcttcgccccttgtatgtttcaactggttctgc 1154
Score = 240 bits (121), Expect = 2e-62
Identities = 292/349 (83%)
Strand = Plus / Plus
Query: 64 tctgctttgcttgaatttgcagccacagatgatgtggtagcattcaaagatgcagttgaa 123
|||||||||||||||||| |||| |||||||| || | | ||||| ||||| ||||||
Sbjct: 211 tctgctttgcttgaattttcagctgcagatgatctgattggcttcaaggatgctgttgaa 270
Query: 124 aaagatggtcatgatgttgatgaggtggggttgtggtatggaagaagggttggttcaaag 183
|| || | ||||||||||||||||| ||| |||||||||||||| |||||||| || ||
Sbjct: 271 aaggaggatcatgatgttgatgaggcgggcttgtggtatggaaggagggttggctcgaat 330
Query: 184 aaatttggctatgaagagagaacccctcttatgattgctgctatgtttggatgcaagggt 243
||||| |||||||||||||| || ||||| ||| ||||||| |||||||| || ||||
Sbjct: 331 aaattgggctatgaagagaggactcctctcatggttgctgccatgtttgggagcctgggt 390
Query: 244 gtgttatcttatattcttgaaacatgccatgttgatgttaacaaggcatgtgggtcagat 303
|||| | ||||||||||| |||| | | ||||||||||||| || || ||||||||
Sbjct: 391 gtgtcaatttatattcttggaacaggtcgtgttgatgttaaccgcgctagtcggtcagat 450
Query: 304 tgtgctactgcacttcactgtgctgttgttgggggttttgcaaaatcccctgaaattgtc 363
| |||||||| ||||| |||||||||| |||||||| ||| |||||||| |||||
Sbjct: 451 ggcgctactgctcttcattgtgctgttgctgggggttctgctgcttcccctgaggttgtc 510
Query: 364 aagcttttgcttgatgcatctgcagatgttaatgctgttgattccaatg 412
||||||||||||||||||||||| |||||| ||||||||||| ||||||
Sbjct: 511 aagcttttgcttgatgcatctgctgatgttcatgctgttgatgccaatg 559
>gnl|LJGI|FS339979 similar to UniRef100_A7NYE3 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 673
Score = 240 bits (121), Expect = 2e-62
Identities = 292/349 (83%)
Strand = Plus / Plus
Query: 64 tctgctttgcttgaatttgcagccacagatgatgtggtagcattcaaagatgcagttgaa 123
|||||||||||||||||| |||| |||||||| || | | ||||| ||||| ||||||
Sbjct: 249 tctgctttgcttgaattttcagctgcagatgatctgattggcttcaaggatgctgttgaa 308
Query: 124 aaagatggtcatgatgttgatgaggtggggttgtggtatggaagaagggttggttcaaag 183
|| || | ||||||||||||||||| ||| |||||||||||||| |||||||| || ||
Sbjct: 309 aaggaggatcatgatgttgatgaggcgggcttgtggtatggaaggagggttggctcgaat 368
Query: 184 aaatttggctatgaagagagaacccctcttatgattgctgctatgtttggatgcaagggt 243
||||| |||||||||||||| || ||||| ||| ||||||| |||||||| || ||||
Sbjct: 369 aaattgggctatgaagagaggactcctctcatggttgctgccatgtttgggagcctgggt 428
Query: 244 gtgttatcttatattcttgaaacatgccatgttgatgttaacaaggcatgtgggtcagat 303
|||| | ||||||||||| |||| | | ||||||||||||| || || ||||||||
Sbjct: 429 gtgtcaatttatattcttggaacaggtcgtgttgatgttaaccgcgctagtcggtcagat 488
Query: 304 tgtgctactgcacttcactgtgctgttgttgggggttttgcaaaatcccctgaaattgtc 363
| |||||||| ||||| |||||||||| |||||||| ||| |||||||| |||||
Sbjct: 489 ggcgctactgctcttcattgtgctgttgctgggggttctgctgcttcccctgaggttgtc 548
Query: 364 aagcttttgcttgatgcatctgcagatgttaatgctgttgattccaatg 412
||||||||||||||||||||||| |||||| ||||||||||| ||||||
Sbjct: 549 aagcttttgcttgatgcatctgctgatgttcatgctgttgatgccaatg 597
>gnl|LJGI|TC78964 similar to UniRef100_Q0GIK4 Cluster: Cys-3-His zinc finger protein;
n=1; Capsicum annuum|Rep: Cys-3-His zinc finger protein
- Capsicum annuum (Bell pepper), partial (59%)
Length = 2650
Score = 93.7 bits (47), Expect = 3e-18
Identities = 134/163 (82%)
Strand = Plus / Plus
Query: 590 tatatggaactgatgagtttagaatgttcacattcaaggtgaaaccttgttcaagggctt 649
||||||||| ||||||||| || |||| || ||||||||||| || || ||||||||||
Sbjct: 772 tatatggaagtgatgagttcaggatgtacagtttcaaggtgaagccatgctcaagggctt 831
Query: 650 attctcatgattggactgagtgcccctttgttcatcctggtgaaaacgcgaggcgtcgcg 709
| || ||||| ||||||||||| || ||||||||||| || || || || ||| | | |
Sbjct: 832 actcccatgactggactgagtgtccttttgttcatccaggggagaatgcaaggaggagag 891
Query: 710 atccaaggaagtatcattatagctgtgtcccttgccctgagtt 752
| |||||||| || | |||||||||||| || |||||||||||
Sbjct: 892 acccaaggaaatacccttatagctgtgttccctgccctgagtt 934
Score = 67.9 bits (34), Expect = 2e-10
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 157 tggtatggaagaagggttggttcaaagaaatttggctatgaagagagaacccctcttatg 216
||||||||||||||| |||| |||||||| | || | |||| |||| ||||||||||||
Sbjct: 300 tggtatggaagaaggattggatcaaagaagatgggatctgaaaagaggacccctcttatg 359
Query: 217 attgctgctatgtttgga 234
|||||| || ||||||||
Sbjct: 360 attgcttctttgtttgga 377
>gnl|LJGI|TC77111 similar to UniRef100_A7NYE3 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 656
Score = 69.9 bits (35), Expect = 5e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 880 tgcttttttgcccacaagaaggaggagcttcgccccttgtatgcttctactggttctgc 938
||||| ||||| |||||| ||||||||||||||||||||||| ||| |||||||||||
Sbjct: 88 tgcttctttgctcacaagctggaggagcttcgccccttgtatgtttcaactggttctgc 146
>gnl|LJGI|BP083473 UniRef100_A7Q2A5 Cluster: Chromosome chr13 scaffold_45, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 214
Score = 58.0 bits (29), Expect = 2e-07
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 652 tctcatgattggactgagtgcccctttgttcatcctg 688
|||||||||||||||||||| || |||||||||||||
Sbjct: 38 tctcatgattggactgagtgtccttttgttcatcctg 2
>gnl|LJGI|BP063686 homologue to UniRef100_A2Q3L5 Cluster: Zinc finger, CCCH-type; n=1;
Medicago truncatula|Rep: Zinc finger, CCCH-type -
Medicago truncatula (Barrel medic), partial (21%)
Length = 514
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 646 gcttattctcatgattggactgagtgcccctttgttcatcc 686
|||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 303 gcttattcacatgattggacagagtgcccttttgttcatcc 263