Miyakogusa Predicted Gene

Lj0g3v0064089.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0064089.1 tr|Q9LZW2|Q9LZW2_ARATH Ovate family protein 1
OS=Arabidopsis thaliana GN=T20L15_110 PE=4 SV=1,47.41,3e-19,seg,NULL;
Ovate,Ovate  protein family, C-terminal; A_thal_3678: uncharacterized
plant-specific domai,CUFF.2935.1
         (570 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP048280 similar to UniRef100_A7NY20 Cluster: Chromosom...   882   0.0  
gnl|LJGI|TC77863 similar to UniRef100_A7NY20 Cluster: Chromosome...   252   2e-66

>gnl|LJGI|BP048280 similar to UniRef100_A7NY20 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (23%)
          Length = 523

 Score =  882 bits (445), Expect = 0.0
 Identities = 445/445 (100%)
 Strand = Plus / Minus

                                                                       
Query: 126 tgagttcatacgatcaaccaaattggatgagttgaagactcatcaattgaaagagaaaaa 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tgagttcatacgatcaaccaaattggatgagttgaagactcatcaattgaaagagaaaaa 464

                                                                       
Query: 186 cagaagaactaagagggagagaaaaaccagtccaatttctagagtgtcctctgctaattc 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 cagaagaactaagagggagagaaaaaccagtccaatttctagagtgtcctctgctaattc 404

                                                                       
Query: 246 cacaggcataaggctcagagtaaattctccaaaacttgcaaacaagaaagttcaaggcta 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cacaggcataaggctcagagtaaattctccaaaacttgcaaacaagaaagttcaaggcta 344

                                                                       
Query: 306 tgcaagaaagagtgtgtcatgcaaagactcatcactaagtgcagattttccagagggatt 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tgcaagaaagagtgtgtcatgcaaagactcatcactaagtgcagattttccagagggatt 284

                                                                       
Query: 366 tgcagttgttaagtcctcatttgatccacaaagagacttcaaggaatcaatggtggagat 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tgcagttgttaagtcctcatttgatccacaaagagacttcaaggaatcaatggtggagat 224

                                                                       
Query: 426 gattatggagaacaatatcagggaatcaaaagatctggagaacctgctggcatgctatct 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gattatggagaacaatatcagggaatcaaaagatctggagaacctgctggcatgctatct 164

                                                                       
Query: 486 ttcactgaattcaggtgaataccatgagctcattgtcaaagcatttgagcaaatatggta 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ttcactgaattcaggtgaataccatgagctcattgtcaaagcatttgagcaaatatggta 104

                                    
Query: 546 tgacatggctcaacttaaaatgtaa 570
           |||||||||||||||||||||||||
Sbjct: 103 tgacatggctcaacttaaaatgtaa 79


>gnl|LJGI|TC77863 similar to UniRef100_A7NY20 Cluster: Chromosome chr6 scaffold_3,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_3, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (34%)
          Length = 1189

 Score =  252 bits (127), Expect = 2e-66
 Identities = 196/219 (89%)
 Strand = Plus / Plus

                                                                        
Query: 352  tttccagagggatttgcagttgttaagtcctcatttgatccacaaagagacttcaaggaa 411
            |||||||| |||||||| |||||||||||||||||||||||||| || || |||| ||| 
Sbjct: 909  tttccagatggatttgctgttgttaagtcctcatttgatccacagagtgatttcagggat 968

                                                                        
Query: 412  tcaatggtggagatgattatggagaacaatatcagggaatcaaaagatctggagaacctg 471
            |||||||||||||||||| |||||||||| ||| |||||||||||||| ||||| |  ||
Sbjct: 969  tcaatggtggagatgattgtggagaacaagatccgggaatcaaaagatttggaggatttg 1028

                                                                        
Query: 472  ctggcatgctatctttcactgaattcaggtgaataccatgagctcattgtcaaagcattt 531
            || || |||||||||||  |||||||| |||||||||||||||| ||||| |||||||||
Sbjct: 1029 cttgcctgctatctttccttgaattcaagtgaataccatgagcttattgttaaagcattt 1088

                                                   
Query: 532  gagcaaatatggtatgacatggctcaacttaaaatgtaa 570
            |||||||| |||||||||||||||||||||| |||||||
Sbjct: 1089 gagcaaatttggtatgacatggctcaacttagaatgtaa 1127