Miyakogusa Predicted Gene
- Lj0g3v0063949.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0063949.1 Non Chatacterized Hit- tr|C6TAG4|C6TAG4_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,85.1,0,18S_RNA_Rcl1p: 18S rRNA biogenesis protein RCL1,RNA
3'-terminal phosphate cyclase type 2; RNA 3' TER,CUFF.2925.1
(777 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68425 similar to UniRef100_Q683I1 Cluster: RNA 3'-ter... 1247 0.0
gnl|LJGI|TC71952 similar to UniRef100_Q85T13 Cluster: Cytochrome... 72 6e-12
>gnl|LJGI|TC68425 similar to UniRef100_Q683I1 Cluster: RNA 3'-terminal phosphate
cyclase-like protein; n=1; Arabidopsis thaliana|Rep: RNA
3'-terminal phosphate cyclase-like protein - Arabidopsis
thaliana (Mouse-ear cress), partial (52%)
Length = 757
Score = 1247 bits (629), Expect = 0.0
Identities = 629/629 (100%)
Strand = Plus / Plus
Query: 1 atggggaagatggcttacaagaggttgaagggaagccagagcttccggcaacggttgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggggaagatggcttacaagaggttgaagggaagccagagcttccggcaacggttgctt 188
Query: 61 ctcgccactctttcctccactcccattctcattgaggacatacgcgctgatgagacgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ctcgccactctttcctccactcccattctcattgaggacatacgcgctgatgagacgtgg 248
Query: 121 cctggtcttcacagccacgagatttcgctcctccggttgtttgagatggtttgcgatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cctggtcttcacagccacgagatttcgctcctccggttgtttgagatggtttgcgatgat 308
Query: 181 tgtcatgttgaaatcaatgaaactggtactaaattgaagtacaagccgggaactattatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tgtcatgttgaaatcaatgaaactggtactaaattgaagtacaagccgggaactattatg 368
Query: 241 ggtggcaaacaatatcatgcccacgagtgtggtctctcaagatccattggttatttccta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ggtggcaaacaatatcatgcccacgagtgtggtctctcaagatccattggttatttccta 428
Query: 301 gagccactcattgtgctaggtttatttgcaaaggaacccctcaccatcaagctcaaagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gagccactcattgtgctaggtttatttgcaaaggaacccctcaccatcaagctcaaagga 488
Query: 361 atcacaaatgattctaaggatccttcggttgataccttcaagtctactgcttttcccata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 atcacaaatgattctaaggatccttcggttgataccttcaagtctactgcttttcccata 548
Query: 421 ttaaagcgctttggagttccctcagaaggcttggatcttaaaatagagagtcgtggagta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ttaaagcgctttggagttccctcagaaggcttggatcttaaaatagagagtcgtggagta 608
Query: 481 ccaccaaatggtggtggcgaagttactttgtcgcttcctgttgttcagagtctcatggca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ccaccaaatggtggtggcgaagttactttgtcgcttcctgttgttcagagtctcatggca 668
Query: 541 gttaattggattgatgaggggtttgttaaaaagattagaggaactacgttttcagtcaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gttaattggattgatgaggggtttgttaaaaagattagaggaactacgttttcagtcaga 728
Query: 601 gtgtctactcagtttgaaaatagcatgat 629
|||||||||||||||||||||||||||||
Sbjct: 729 gtgtctactcagtttgaaaatagcatgat 757
>gnl|LJGI|TC71952 similar to UniRef100_Q85T13 Cluster: Cytochrome b; n=1; Anolis
roquet|Rep: Cytochrome b - Anolis roquet, partial (5%)
Length = 485
Score = 71.9 bits (36), Expect = 6e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 702 acaggcaggaaactcacctggatatggaatttcacttgttgcggagactact 753
|||||| |||||||||| ||||||||||||||||||| |||| |||||||||
Sbjct: 244 acaggctggaaactcacatggatatggaatttcacttcttgcagagactact 295