Miyakogusa Predicted Gene
- Lj0g3v0063869.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0063869.1 Non Chatacterized Hit- tr|D7TF60|D7TF60_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,83.41,0,AA_TRNA_LIGASE_I,Aminoacyl-tRNA synthetase, class I,
conserved site; TRNASYNTHVAL,Valine-tRNA ligase,CUFF.2934.1
(1278 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV780444 similar to UniRef100_A7PRE1 Cluster: Chromosom... 729 0.0
gnl|LJGI|BW616096 homologue to UniRef100_A7PME4 Cluster: Chromos... 163 3e-39
>gnl|LJGI|AV780444 similar to UniRef100_A7PRE1 Cluster: Chromosome chr14 scaffold_26,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_26, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 515
Score = 729 bits (368), Expect = 0.0
Identities = 386/392 (98%)
Strand = Plus / Plus
Query: 98 acacgcgccgtcgcgccattccctgttgccgccgcttcaccacaactcgccttctcgcag 157
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 122 acacgcgccgtcgcgccattccctgtggccgccgcttcaccacaactcgccttctcgcag 181
Query: 158 ttgctgcttcagagaatggtgtctttacctctcctgagatagccaaatcattcgactttt 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttgctgcttcagagaatggtgtctttacctctcctgagatagccaaatcattcgactttt 241
Query: 218 ccgccgaagaacgcatatataattggtgggagtctcaagggtattttaagccgacttttg 277
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 242 ccgccgaagaacgcatatataatgggtgggagtctcaagggtattttaagccgacttggg 301
Query: 278 accggggaagtgatccttttgtgatatcaatgccgcctcctaatgttactggttctctgc 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 accggggaagtgatccttttgtgatatcaatgccgcctcctaatgttactggttctctgc 361
Query: 338 acatggggcatgcgatgtttgtgacacttgaggatataatggttaggtacaatcgcatga 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 acatggggcatgcgatgtttgtgacacttgaggatataatggttaggtacaatcgcatga 421
Query: 398 agggaaggccaaccctttggcttcctgggacagatcatgctggtattgcgactcagttgg 457
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 agggaaggccaagcctttggcttcctgggacagatcatgctggtattgcgactcagttgg 481
Query: 458 ttgttgaaagaatgctagcttctgaaggaata 489
|||| |||||||||||||||||||||||||||
Sbjct: 482 ttgtagaaagaatgctagcttctgaaggaata 513
>gnl|LJGI|BW616096 homologue to UniRef100_A7PME4 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 476
Score = 163 bits (82), Expect = 3e-39
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 974 agcatgttgataaagagtttggaacgggagtattgaaaattagtccaggacatgatcata 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 agcatgttgataaagagtttggaacgggagtattgaaaattagtccaggacatgatcata 454
Query: 1034 atgactatctacttgctcgcaa 1055
||||||||||||||||||||||
Sbjct: 455 atgactatctacttgctcgcaa 476