Miyakogusa Predicted Gene

Lj0g3v0063689.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0063689.1 CUFF.2921.1
         (322 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC594726 similar to UniRef100_Q84VV2 Cluster: At4g03120...   178   1e-44
gnl|LJGI|TC81895 similar to UniRef100_Q84VV2 Cluster: At4g03120;...   176   5e-44
gnl|LJGI|BP055206 similar to UniRef100_A7NWP7 Cluster: Chromosom...   151   3e-36

>gnl|LJGI|DC594726 similar to UniRef100_Q84VV2 Cluster: At4g03120; n=1; Arabidopsis
           thaliana|Rep: At4g03120 - Arabidopsis thaliana
           (Mouse-ear cress), partial (11%)
          Length = 448

 Score =  178 bits (90), Expect = 1e-44
 Identities = 115/125 (92%), Gaps = 1/125 (0%)
 Strand = Plus / Plus

                                                                       
Query: 96  aggggttctttgcttcttgcagaaattggtggcaggtggcataaacagatttcatcttct 155
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 aggggttctttgcttcttgcagaaattggtggcaggtggcataaacagatttcatcttct 257

                                                                       
Query: 156 caaaaaggg-nnnnnnnnngcaaccatatgcctcagagagagcgagcgcgaagattcttc 214
           |||||||||          |||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 caaaaagggatgaaaaaaagcaaccatatgcctcagagagagcgagcgcgaagattcttc 317

                
Query: 215 tcagg 219
           |||||
Sbjct: 318 tcagg 322


>gnl|LJGI|TC81895 similar to UniRef100_Q84VV2 Cluster: At4g03120; n=1; Arabidopsis
           thaliana|Rep: At4g03120 - Arabidopsis thaliana
           (Mouse-ear cress), partial (8%)
          Length = 526

 Score =  176 bits (89), Expect = 5e-44
 Identities = 114/124 (91%), Gaps = 1/124 (0%)
 Strand = Plus / Plus

                                                                       
Query: 96  aggggttctttgcttcttgcagaaattggtggcaggtggcataaacagatttcatcttct 155
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 aggggttctttgcttcttgcagaaattggtggcaggtggcataaacagatttcatcttct 290

                                                                       
Query: 156 caaaaaggg-nnnnnnnnngcaaccatatgcctcagagagagcgagcgcgaagattcttc 214
           |||||||||          |||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 caaaaagggatgaaaaaaagcaaccatatgcctcagagagagcgagcgcgaagattcttc 350

               
Query: 215 tcag 218
           ||||
Sbjct: 351 tcag 354



 Score = 60.0 bits (30), Expect = 9e-09
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 293 cagtgaaattttcaagggtgctttggtgaa 322
           ||||||||||||||||||||||||||||||
Sbjct: 352 cagtgaaattttcaagggtgctttggtgaa 381


>gnl|LJGI|BP055206 similar to UniRef100_A7NWP7 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (10%)
          Length = 586

 Score =  151 bits (76), Expect = 3e-36
 Identities = 94/103 (91%)
 Strand = Plus / Plus

                                                                       
Query: 117 gaaattggtggcaggtggcataaacagatttcatcttctcaaaaagggnnnnnnnnngca 176
           ||||||||||||||||||||||||||||||||||||||||||||||||         |||
Sbjct: 189 gaaattggtggcaggtggcataaacagatttcatcttctcaaaaagggaaaaaaaaagca 248

                                                      
Query: 177 accatatgcctcagagagagcgagcgcgaagattcttctcagg 219
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 accatatgcctcagagagagcgagcgcgaagattcttctcagg 291