Miyakogusa Predicted Gene
- Lj0g3v0063309.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0063309.2 Non Chatacterized Hit- tr|G0QLM7|G0QLM7_ICHMG
Putative uncharacterized protein (Fragment)
OS=Ichthyo,54.55,2e-18,seg,NULL; UNCHARACTERIZED,NULL,CUFF.2869.2
(1194 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82039 similar to UniRef100_A7NWD9 Cluster: Chromosome... 1055 0.0
gnl|LJGI|TC71257 similar to UniRef100_A7NWD9 Cluster: Chromosome... 624 e-178
gnl|LJGI|TC68641 similar to UniRef100_A7NWD9 Cluster: Chromosome... 60 3e-08
>gnl|LJGI|TC82039 similar to UniRef100_A7NWD9 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 762
Score = 1055 bits (532), Expect = 0.0
Identities = 584/599 (97%), Gaps = 5/599 (0%)
Strand = Plus / Plus
Query: 1 atgaaaagagcaatccaaaagaaggcaaaatttgacattacggacctcaatactattaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 atgaaaagagcaatccaaaagaaggcaaaatttgacattacggacctcaatactattaag 227
Query: 61 gtagcaaaatcatgttttgttccagctctgcttggccatgccattgacgatgattttata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gtagcaaaatcatgttttgttccagctctgcttggccatgccattgacgatgattttata 287
Query: 121 catccccatcactctgatcgtatatttgaagcttacatgggagacaaaaatataattaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 catccccatcactctgatcgtatatttgaagcttacatgggagacaaaaatataattaaa 347
Query: 181 tttgagggagatcacaattctccccgtcctcagttttactttgattccataaacannnnn 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tttgagggagatcacaattctccccgtcctcagttttactttgattccataaacattttt 407
Query: 241 nnn-cacaatgttttgcaacctccagaggatgaggttggggaatcattttttgacaccga 299
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 408 ttttcacaatgttttgcaacctccagaggatgaggttggggaatcaatttttgacaccga 467
Query: 300 ttactttggtaaggatgtctggagatctgtgcatgaattaggctacagcaatgaatcgtc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ttactttggtaaggatgtctggagatctgtgcatgaattaggctacagcaatgaatcgtc 527
Query: 360 atctaaaaacaaagaaccatcaactagcagtacaatagatgctattaaggaagttcgttc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 atctaaaaacaaagaaccatcaactagcagtacaatagatgctattaaggaagttcgttc 587
Query: 420 aaaacgaccgatgagtaggatggaggttccatcggatatttcttcaaaagatgaacatgg 479
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 588 aaaacgaccgatgagtaggatggaggttccatcggatatttcttc-aaagatgaacatgg 646
Query: 480 agaaaatgaggaagagaagcgcggtgatttttccccaccgtcctcatccatgataagctt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 agaaaatgaggaagagaagcgcggtgatttttccccaccgtcctcatccatgataagctt 706
Query: 540 tgatttgtcaaatggccatccctatggtccccttgttcccaccacgtccgatgacgatc 598
|||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 707 tgatttgtcaaatggccatccctatggt-cccttgttcc--acacgtccgatgacgatc 762
>gnl|LJGI|TC71257 similar to UniRef100_A7NWD9 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (9%)
Length = 529
Score = 624 bits (315), Expect = e-178
Identities = 315/315 (100%)
Strand = Plus / Plus
Query: 880 tgtgcaccattgaaaactgagtcaaatcatgtttcagtgaaccgttcccaagatttgggt 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgcaccattgaaaactgagtcaaatcatgtttcagtgaaccgttcccaagatttgggt 60
Query: 940 tctgagacaagctcagatggggaagtgctgccaccgccaccgccactggagacatcatca 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctgagacaagctcagatggggaagtgctgccaccgccaccgccactggagacatcatca 120
Query: 1000 gcaacagagtccagccacgcaagtggttctgcacgttgtgacagttctggtagtttacaa 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaacagagtccagccacgcaagtggttctgcacgttgtgacagttctggtagtttacaa 180
Query: 1060 agttcatcagagagtgacatatcacatagtacaaaagccacagtaactgttgttaagaac 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agttcatcagagagtgacatatcacatagtacaaaagccacagtaactgttgttaagaac 240
Query: 1120 cctgcaagcaatgtcatggatggcttaatgcgtcgttgggatttcaattttttcagaaac 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctgcaagcaatgtcatggatggcttaatgcgtcgttgggatttcaattttttcagaaac 300
Query: 1180 ggtaacaacagatga 1194
|||||||||||||||
Sbjct: 301 ggtaacaacagatga 315
>gnl|LJGI|TC68641 similar to UniRef100_A7NWD9 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (18%)
Length = 724
Score = 60.0 bits (30), Expect = 3e-08
Identities = 96/118 (81%)
Strand = Plus / Plus
Query: 1062 ttcatcagagagtgacatatcacatagtacaaaagccacagtaactgttgttaagaaccc 1121
||||||||| | |||||||||||||| || ||||||||| ||||||| ||| ||| ||
Sbjct: 384 ttcatcagaaaatgacatatcacataagaccaaagccacattaactgtcattaggaatcc 443
Query: 1122 tgcaagcaatgtcatggatggcttaatgcgtcgttgggatttcaattttttcagaaac 1179
||| | ||||| || | || ||||| || |||||||| ||||| ||||||||||||
Sbjct: 444 atcaaaccatgtcgtgaacggattaattcgccgttgggacttcaactttttcagaaac 501