Miyakogusa Predicted Gene

Lj0g3v0063139.4
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0063139.4 Non Chatacterized Hit- tr|I1GTW5|I1GTW5_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,42.5,0.003,
,CUFF.2857.4
         (177 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81081 similar to UniRef100_Q45NM7 Cluster: Histidyl-t...   212   5e-55
gnl|LJGI|TC69384 similar to UniRef100_A7PXH0 Cluster: Chromosome...    80   5e-15
gnl|LJGI|TC72864 similar to UniRef100_Q0DDZ6 Cluster: Os06g01869...    70   5e-12
gnl|LJGI|BP055135 similar to UniRef100_Q45NM7 Cluster: Histidyl-...    62   1e-09

>gnl|LJGI|TC81081 similar to UniRef100_Q45NM7 Cluster: Histidyl-tRNA synthetase; n=1;
           Medicago sativa|Rep: Histidyl-tRNA synthetase - Medicago
           sativa (Alfalfa), partial (10%)
          Length = 728

 Score =  212 bits (107), Expect = 5e-55
 Identities = 107/107 (100%)
 Strand = Plus / Plus

                                                                       
Query: 71  aggttcagatcagattccagcagttggtgtatagagagagtatttgctataatggagcag 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84  aggttcagatcagattccagcagttggtgtatagagagagtatttgctataatggagcag 143

                                                          
Query: 131 cattggaaggatctaaaccaagctccatgctttgcatttttacatga 177
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 cattggaaggatctaaaccaagctccatgctttgcatttttacatga 190


>gnl|LJGI|TC69384 similar to UniRef100_A7PXH0 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (73%)
          Length = 1473

 Score = 79.8 bits (40), Expect = 5e-15
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                   
Query: 2   tgttgataggaagcaaatttgatgatttcattcagcttccagttgatttgcaatgg 57
           |||||||||||| |||||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 725 tgttgataggaaccaaatttgatgatttcattcagctcccaattgatctgcaatgg 780


>gnl|LJGI|TC72864 similar to UniRef100_Q0DDZ6 Cluster: Os06g0186900 protein; n=2;
           Oryza sativa Japonica Group|Rep: Os06g0186900 protein -
           Oryza sativa subsp. japonica (Rice), partial (12%)
          Length = 593

 Score = 69.9 bits (35), Expect = 5e-12
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                          
Query: 104 gagagagtatttgctataatggagcagcattggaaggatctaaacca 150
           |||||||||||||| ||||||||||||||||||||||| | ||||||
Sbjct: 129 gagagagtatttgccataatggagcagcattggaaggaccaaaacca 175


>gnl|LJGI|BP055135 similar to UniRef100_Q45NM7 Cluster: Histidyl-tRNA synthetase; n=1;
           Medicago sativa|Rep: Histidyl-tRNA synthetase - Medicago
           sativa (Alfalfa), partial (28%)
          Length = 517

 Score = 61.9 bits (31), Expect = 1e-09
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                  
Query: 105 agagagtatttgctataatggagcagcattggaaggatc 143
           ||||||||||| | |||||||||||||||||||||||||
Sbjct: 163 agagagtattttccataatggagcagcattggaaggatc 125