Miyakogusa Predicted Gene
- Lj0g3v0062939.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0062939.1 Non Chatacterized Hit- tr|I3S998|I3S998_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,53.77,2e-17,FBD,FBD; domain in FBox and BRCT domain containing
pl,FBD,CUFF.2839.1
(307 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61348 similar to UniRef100_A7QK65 Cluster: Chromosome... 188 1e-47
gnl|LJGI|TC75628 weakly similar to UniRef100_A2Q1U7 Cluster: Cyc... 88 4e-17
gnl|LJGI|BP083641 UniRef100_A3N1N8 Cluster: Maltose transport sy... 62 2e-09
gnl|LJGI|FS329415 similar to UniRef100_Q2HUI7 Cluster: Cyclin-li... 54 5e-07
gnl|LJGI|FS355536 52 2e-06
>gnl|LJGI|TC61348 similar to UniRef100_A7QK65 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 1489
Score = 188 bits (95), Expect = 1e-47
Identities = 191/223 (85%)
Strand = Plus / Plus
Query: 55 tctttttcgcctgaccctcatattgttccgaaatgtcttacttcacggttcagcgagtgc 114
||||||| ||||||||||||| ||||||| |||| |||||||||| ||| || |||||
Sbjct: 1076 tcttttttgcctgaccctcattttgttcctgaatgccttacttcacagtttagaaagtgc 1135
Query: 115 tctcttaaatgttgctatggtacagcaagtgatctgcgatttgcaaaatatataatgcat 174
|||||| ||| || ||||||||||| |||||| ||| |||||||||||||||| |||||
Sbjct: 1136 tctcttgaatattactatggtacagaaagtgagctgagatttgcaaaatatatcatgcag 1195
Query: 175 aattcaacaactttacggaccatgacgatttgctgtgagtcttccttacgtccacccaga 234
||||| |||||||||||||||||||| ||||||| | || |||||||| |||||| |
Sbjct: 1196 aattccacaactttacggaccatgacaatttgctctaagccttccttaagtccacaggca 1255
Query: 235 aaacatgaaatgcttaaagaattagctttatgcccaaggagat 277
|||| | ||||||||||| ||||||| |||||||||| |||||
Sbjct: 1256 aaacttaaaatgcttaaacaattagcattatgcccaaagagat 1298
>gnl|LJGI|TC75628 weakly similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD;
n=1; Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (11%)
Length = 475
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 234 aaaacatgaaatgcttaaagaattagctttatgcccaaggagatctgcattatgtgaact 293
||||||||||||||||||| ||||||||||||| |||||||||||||| || ||||||||
Sbjct: 202 aaaacatgaaatgcttaaacaattagctttatgtccaaggagatctgccttgtgtgaact 261
>gnl|LJGI|BP083641 UniRef100_A3N1N8 Cluster: Maltose transport system permease protein
MalF; n=1; Actinobacillus pleuropneumoniae L20|, partial
(2%)
Length = 336
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 240 tgaaatgcttaaagaattagctttatgcccaaggagatctgcattatgtgaactcttatt 299
||||||||| |||||||| | | ||||||||| || |||||| |||||||||| |||||
Sbjct: 297 tgaaatgctaaaagaattgtcctcatgcccaagaagttctgcaatatgtgaacttttatt 238
Query: 300 taaatga 306
|||||||
Sbjct: 237 taaatga 231
>gnl|LJGI|FS329415 similar to UniRef100_Q2HUI7 Cluster: Cyclin-like F-box; FBD; Zinc
finger FYVE/PHD-type; n=1; Medicago truncatula|Rep:,
partial (2%)
Length = 498
Score = 54.0 bits (27), Expect = 5e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 240 tgaaatgcttaaagaattagctttatgcccaaggagatctgcattatgtgaactcttatt 299
||||||||| |||||||| | | |||||||||||| ||| | |||||||||| |||||
Sbjct: 378 tgaaatgctaaaagaattgtcctcatgcccaaggagttctacgatatgtgaacttttatt 437
Query: 300 taaatga 306
|||||||
Sbjct: 438 taaatga 444
>gnl|LJGI|FS355536
Length = 711
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 154 tttgcaaaatatataatgcataattcaacaactttacggaccatgacgatttgc 207
|||||||||||||| ||||| ||||||| | ||||||||| ||||| ||||||
Sbjct: 287 tttgcaaaatatattatgcagaattcaagagttttacggacaatgacaatttgc 234