Miyakogusa Predicted Gene

Lj0g3v0062689.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0062689.1 Non Chatacterized Hit- tr|H2ZFQ9|H2ZFQ9_CIOSA
Uncharacterized protein (Fragment) OS=Ciona savignyi
P,43.48,5.2,seg,NULL,CUFF.2827.1
         (164 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74284 homologue to UniRef100_A7QEQ4 Cluster: Chromoso...   133   4e-31

>gnl|LJGI|TC74284 homologue to UniRef100_A7QEQ4 Cluster: Chromosome chr16
           scaffold_86, whole genome shotgun sequence; n=2; Vitis
           vinifera|Rep: Chromosome chr16 scaffold_86, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (5%)
          Length = 506

 Score =  133 bits (67), Expect = 4e-31
 Identities = 67/67 (100%)
 Strand = Plus / Minus

                                                                       
Query: 98  ggtttgataaaaattacagctttggtttaactgagattttccctgtagaggaggggatgg 157
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ggtttgataaaaattacagctttggtttaactgagattttccctgtagaggaggggatgg 238

                  
Query: 158 gttagtg 164
           |||||||
Sbjct: 237 gttagtg 231



 Score = 56.0 bits (28), Expect = 7e-08
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 1   atgtccaaaggaaaccaaagtggaaatg 28
           ||||||||||||||||||||||||||||
Sbjct: 394 atgtccaaaggaaaccaaagtggaaatg 367