Miyakogusa Predicted Gene
- Lj0g3v0062309.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0062309.1 Non Chatacterized Hit- tr|E1ZLR1|E1ZLR1_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,25.99,4e-17,FAMILY NOT NAMED,NULL; ATHOOK,AT hook-like; WD40
repeat-like,WD40-repeat-containing domain; DNA bind,CUFF.2802.1
(3189 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61076 1086 0.0
gnl|LJGI|TC68513 similar to UniRef100_Q9LN45 Cluster: F18O14.25;... 1041 0.0
gnl|LJGI|AV408810 similar to UniRef100_A7QWU9 Cluster: Chromosom... 216 6e-55
gnl|LJGI|TC71268 similar to UniRef100_Q9LN45 Cluster: F18O14.25;... 206 6e-52
>gnl|LJGI|TC61076
Length = 742
Score = 1086 bits (548), Expect = 0.0
Identities = 548/548 (100%)
Strand = Plus / Plus
Query: 123 tgttgctgttgtttctgcaatcaatggcggtgctgacactggaccaaggatatctctctt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tgttgctgttgtttctgcaatcaatggcggtgctgacactggaccaaggatatctctctt 254
Query: 183 cgattactcggttgagaatttcttcagagacatggacaccattgccagactctgcgggaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cgattactcggttgagaatttcttcagagacatggacaccattgccagactctgcgggaa 314
Query: 243 cgaagaacaacaccacattgatcttgatcaaagcgagatccagagaatgtcttcctctgt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cgaagaacaacaccacattgatcttgatcaaagcgagatccagagaatgtcttcctctgt 374
Query: 303 cactttcttacgacaatggagagattttaaatacccatcgagaagcattagatttgctca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cactttcttacgacaatggagagattttaaatacccatcgagaagcattagatttgctca 434
Query: 363 cggccttgagagctcggagtgctgtcagggaaaagatgtcggtgccctaagtttacctca 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cggccttgagagctcggagtgctgtcagggaaaagatgtcggtgccctaagtttacctca 494
Query: 423 gttttcatctgccattgttcctaagcatgatatgcaaaaggaggttgaatctcaggattc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gttttcatctgccattgttcctaagcatgatatgcaaaaggaggttgaatctcaggattc 554
Query: 483 cagagactttgtgatgaatgttggaggctccatatgggcattagattggtgtccccggat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 cagagactttgtgatgaatgttggaggctccatatgggcattagattggtgtccccggat 614
Query: 543 acatgaagatcctgattgttcaattaaatgtgagtttattgctgttgctgctcatccacc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 acatgaagatcctgattgttcaattaaatgtgagtttattgctgttgctgctcatccacc 674
Query: 603 tggctcttcttatcacaagattggtgcctcacttgctggtagaggtgtcgtacaaatatg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tggctcttcttatcacaagattggtgcctcacttgctggtagaggtgtcgtacaaatatg 734
Query: 663 gtgtattg 670
||||||||
Sbjct: 735 gtgtattg 742
Score = 109 bits (55), Expect = 1e-22
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 1 atggaagaagaagcagcgaacgacgacaacgtatgcatcgctaaactgtttggtt 55
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atggaagaagaagcagcgaacgacgacaacgtatgcatcgctaaactgtttggtt 127
>gnl|LJGI|TC68513 similar to UniRef100_Q9LN45 Cluster: F18O14.25; n=2; Arabidopsis
thaliana|Rep: F18O14.25 - Arabidopsis thaliana (Mouse-ear
cress), partial (3%)
Length = 743
Score = 1041 bits (525), Expect = 0.0
Identities = 525/525 (100%)
Strand = Plus / Plus
Query: 2665 tcaacgctcattgtcaacactccagtaccaaacactcgattcccattgaggaagccacaa 2724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcaacgctcattgtcaacactccagtaccaaacactcgattcccattgaggaagccacaa 60
Query: 2725 gaaagggcccggcatgctcattctttcagagagtttttatccaaggaaaatctgagcaaa 2784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaagggcccggcatgctcattctttcagagagtttttatccaaggaaaatctgagcaaa 120
Query: 2785 agtgtgaataatcaaatggcaaaagctaatgatgctgattctcagactttagccctatgt 2844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtgtgaataatcaaatggcaaaagctaatgatgctgattctcagactttagccctatgt 180
Query: 2845 gatggtgacaacttgagtttggaatctgatgaagcattgtcttctggagagcagcatggg 2904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatggtgacaacttgagtttggaatctgatgaagcattgtcttctggagagcagcatggg 240
Query: 2905 agagagaaattgagttccagtagaaagaaaaaggcagtagaaagcacagctattgtttgc 2964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agagagaaattgagttccagtagaaagaaaaaggcagtagaaagcacagctattgtttgc 300
Query: 2965 accgatgatgtgtcgacaagtagacgtgcagttgatgacgagaagtctgattttgggggt 3024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 accgatgatgtgtcgacaagtagacgtgcagttgatgacgagaagtctgattttgggggt 360
Query: 3025 atacctgaagtctttcctcccaaaatggttgcattgcatagagtgagatggaacatgaac 3084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atacctgaagtctttcctcccaaaatggttgcattgcatagagtgagatggaacatgaac 420
Query: 3085 atgggtagtgagagatggctgtgctatggaggagctagtggcgttttacgttgccagcag 3144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgggtagtgagagatggctgtgctatggaggagctagtggcgttttacgttgccagcag 480
Query: 3145 attgagttatctcttaccgataaaaaatgggccttgaagagatga 3189
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attgagttatctcttaccgataaaaaatgggccttgaagagatga 525
>gnl|LJGI|AV408810 similar to UniRef100_A7QWU9 Cluster: Chromosome chr13 scaffold_210,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_210, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 388
Score = 216 bits (109), Expect = 6e-55
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 1919 ctcatgtattgagagcaatttatgggcagagagagggcactgatccacgttttataaaac 1978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ctcatgtattgagagcaatttatgggcagagagagggcactgatccacgttttataaaac 62
Query: 1979 tagatcctgtattcaaatgctctatgttaaagcgtggtggcagacaaag 2027
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tagatcctgtattcaaatgctctatgttaaagcgtggtggcagacaaag 111
>gnl|LJGI|TC71268 similar to UniRef100_Q9LN45 Cluster: F18O14.25; n=2; Arabidopsis
thaliana|Rep: F18O14.25 - Arabidopsis thaliana (Mouse-ear
cress), partial (3%)
Length = 671
Score = 206 bits (104), Expect = 6e-52
Identities = 164/184 (89%)
Strand = Plus / Plus
Query: 3006 gaagtctgattttgggggtatacctgaagtctttcctcccaaaatggttgcattgcatag 3065
|||||| |||||||| ||| ||||||||| ||||||||||||||||| |||||||||||
Sbjct: 206 gaagtcagattttggaggtgaacctgaagtgtttcctcccaaaatggtggcattgcatag 265
Query: 3066 agtgagatggaacatgaacatgggtagtgagagatggctgtgctatggaggagctagtgg 3125
|||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||
Sbjct: 266 agtgagatggaacatgaacaagggtagtgagagatggttgtgctttggaggagctagtga 325
Query: 3126 cgttttacgttgccagcagattgagttatctcttaccgataaaaaatgggccttgaagag 3185
||||||||||||| |||||||| | |||| || ||||| |||||||||||||||||
Sbjct: 326 tcttttacgttgccaagagattgagctctctcatattgataagaaatgggccttgaagag 385
Query: 3186 atga 3189
||||
Sbjct: 386 atga 389
Score = 85.7 bits (43), Expect = 2e-15
Identities = 79/91 (86%)
Strand = Plus / Plus
Query: 2779 agcaaaagtgtgaataatcaaatggcaaaagctaatgatgctgattctcagactttagcc 2838
||||||||||||||||||| |||||||||||||| | || ||||| | |||||||||
Sbjct: 15 agcaaaagtgtgaataatccaatggcaaaagctattaattttgattgccgtactttagcc 74
Query: 2839 ctatgtgatggtgacaacttgagtttggaat 2869
|| | |||||||||||| |||||||||||||
Sbjct: 75 ctttatgatggtgacaatttgagtttggaat 105