Miyakogusa Predicted Gene
- Lj0g3v0060589.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0060589.1 Non Chatacterized Hit- tr|I1M5C7|I1M5C7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20167 PE,82.82,0,no
description,WD40/YVTN repeat-like-containing domain; coiled-coil,NULL;
WD_REPEATS_2,WD40 repeat;
,NODE_58275_length_1453_cov_76.980042.path1.1
(1398 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO011803 similar to UniRef100_A2Q445 Cluster: WD40-like... 553 e-156
gnl|LJGI|BP032030 similar to UniRef100_A2Q445 Cluster: WD40-like... 525 e-148
gnl|LJGI|TC59310 homologue to UniRef100_Q52ZH8 Cluster: FVE; n=1... 214 1e-54
gnl|LJGI|BW623984 similar to UniRef100_Q52ZH8 Cluster: FVE; n=1;... 139 5e-32
gnl|LJGI|TC62184 homologue to UniRef100_A2Q555 Cluster: WD40-lik... 125 8e-28
gnl|LJGI|FS328729 weakly similar to UniRef100_A7R4J8 Cluster: Ch... 78 2e-13
gnl|LJGI|TC77405 similar to UniRef100_A7QN12 Cluster: Chromosome... 56 6e-07
gnl|LJGI|BP051713 54 2e-06
>gnl|LJGI|GO011803 similar to UniRef100_A2Q445 Cluster: WD40-like; n=1; Medicago
truncatula|Rep: WD40-like - Medicago truncatula (Barrel
medic), partial (26%)
Length = 488
Score = 553 bits (279), Expect = e-156
Identities = 282/283 (99%)
Strand = Plus / Plus
Query: 828 ggatgcacgagttggatcaactccagttgccaaggttgagaaggcgcatgatggagatct 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatgcacgagttggatcaactccagttgccaaggttgagaaggcgcatgatggagatct 60
Query: 888 tcattgtgttgattggaatcctcatgatataaattttattctgactggttctgctgataa 947
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 61 tcattgtgttgattggaatcctcatgatataaattttattctgactggttctactgataa 120
Query: 948 tacggttcacatgtttgatcgccggaaatttaacaatcgcggacttgggtctcctgttca 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacggttcacatgtttgatcgccggaaatttaacaatcgcggacttgggtctcctgttca 180
Query: 1008 taaatttaaaggtcatgatgctgcagtcctctgtgtacagtggtgtcctgacaaatcatc 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taaatttaaaggtcatgatgctgcagtcctctgtgtacagtggtgtcctgacaaatcatc 240
Query: 1068 tgtatttggaagtgctgctgaagatggcattttgaacatctgg 1110
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtatttggaagtgctgctgaagatggcattttgaacatctgg 283
Score = 216 bits (109), Expect = 3e-55
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 1290 tggcaccctacagatatggcggatgattgatctgatttatcgacctgaggaggaggtgct 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tggcaccctacagatatggcggatgattgatctgatttatcgacctgaggaggaggtgct 340
Query: 1350 ggatgaacttgataagctccaatctcaaattactggaagtaattgatga 1398
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ggatgaacttgataagctccaatctcaaattactggaagtaattgatga 389
>gnl|LJGI|BP032030 similar to UniRef100_A2Q445 Cluster: WD40-like; n=1; Medicago
truncatula|Rep: WD40-like - Medicago truncatula (Barrel
medic), partial (15%)
Length = 440
Score = 525 bits (265), Expect = e-148
Identities = 265/265 (100%)
Strand = Plus / Minus
Query: 1134 aggttcggcggctgatccaaaaggatcagataacccccctggtttattctttcgacatgc 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aggttcggcggctgatccaaaaggatcagataacccccctggtttattctttcgacatgc 381
Query: 1194 tgggcatagggacaagattgttgacttccattggaatgcttctgagccatggacgattgt 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgggcatagggacaagattgttgacttccattggaatgcttctgagccatggacgattgt 321
Query: 1254 tagtgtctctgatgattgtggaagtactggtggaggtggcaccctacagatatggcggat 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tagtgtctctgatgattgtggaagtactggtggaggtggcaccctacagatatggcggat 261
Query: 1314 gattgatctgatttatcgacctgaggaggaggtgctggatgaacttgataagctccaatc 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gattgatctgatttatcgacctgaggaggaggtgctggatgaacttgataagctccaatc 201
Query: 1374 tcaaattactggaagtaattgatga 1398
|||||||||||||||||||||||||
Sbjct: 200 tcaaattactggaagtaattgatga 176
>gnl|LJGI|TC59310 homologue to UniRef100_Q52ZH8 Cluster: FVE; n=1; Pisum sativum|Rep:
FVE - Pisum sativum (Garden pea), partial (45%)
Length = 785
Score = 214 bits (108), Expect = 1e-54
Identities = 315/384 (82%)
Strand = Plus / Plus
Query: 58 tacacacagtggaaatctctcgttcccgttctctacgactggctcgctaaccacaacctc 117
|||||||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||||||||
Sbjct: 269 tacacacaatggaagtctcttgttcctgtcctctatgactggctcgccaaccacaacctc 328
Query: 118 gtctggccttcactctcatgccgatggggtcctcaactcgaacacgctacctacaagaac 177
|| ||||| || ||||| ||||||||||||||||| || || || ||||||||||| ||
Sbjct: 329 gtttggccctctctctcttgccgatggggtcctcagctggagcaagctacctacaaaaat 388
Query: 178 cgccaccgtctctatctctctgaacagactgacggcactgttcccaacactctcgtcatc 237
||||| | ||||| || ||||| |||||||| || | ||||| || ||||| || ||
Sbjct: 389 cgccaaaggctctacctttctgagcagactgatggtagcgttccgaatactctggtgatt 448
Query: 238 gctaattgcgaggttgttaaacctagggttgctgctgctgaacacatttcacagttcaat 297
|| ||||| ||||||||||| ||||||||||| |||||||| |||||||| ||||| |||
Sbjct: 449 gcgaattgtgaggttgttaagcctagggttgcagctgctgagcacatttctcagtttaat 508
Query: 298 gaagaagctcgctctccctttgtcaagaagttcaaaactattctgcatcctggtgaggtg 357
|| || || ||||| || ||||| ||||||| ||| || || | |||||||| ||||||
Sbjct: 509 gaggaggcgcgctccccatttgtgaagaagtacaagaccatcatacatcctggcgaggtg 568
Query: 358 aacagaatcagggaactcccgcaagatggtaagatagtagccacacacacagatagtccc 417
|||||||| ||||||| ||||| | || |||||||||||| || || || |||||
Sbjct: 569 aacagaattcgggaactgccgcagagttctaggatagtagccactcatactgacagtcct 628
Query: 418 aatgtactgatttgggatgttgaa 441
|||| || |||||||||||||||
Sbjct: 629 gatgtccttatttgggatgttgaa 652
>gnl|LJGI|BW623984 similar to UniRef100_Q52ZH8 Cluster: FVE; n=1; Pisum sativum|Rep:
FVE - Pisum sativum (Garden pea), partial (25%)
Length = 509
Score = 139 bits (70), Expect = 5e-32
Identities = 175/210 (83%)
Strand = Plus / Plus
Query: 58 tacacacagtggaaatctctcgttcccgttctctacgactggctcgctaaccacaacctc 117
|||||||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||||||||
Sbjct: 300 tacacacaatggaagtctcttgttcctgtcctctatgactggctcgccaaccacaacctc 359
Query: 118 gtctggccttcactctcatgccgatggggtcctcaactcgaacacgctacctacaagaac 177
|| ||||| || ||||| ||||||||||||||||| || || || ||||||||||| ||
Sbjct: 360 gtttggccctctctctcttgccgatggggtcctcagctggagcaagctacctacaaaaat 419
Query: 178 cgccaccgtctctatctctctgaacagactgacggcactgttcccaacactctcgtcatc 237
||||| | ||||| || ||||| |||||||| || | ||||| || ||||| || ||
Sbjct: 420 cgccaaaggctctacctttctgagcagactgatggtagcgttccgaatactctggtgatt 479
Query: 238 gctaattgcgaggttgttaaacctagggtt 267
|| ||||| ||||||||||| |||||||||
Sbjct: 480 gcgaattgtgaggttgttaagcctagggtt 509
>gnl|LJGI|TC62184 homologue to UniRef100_A2Q555 Cluster: WD40-like; n=1; Medicago
truncatula|Rep: WD40-like - Medicago truncatula (Barrel
medic), partial (42%)
Length = 941
Score = 125 bits (63), Expect = 8e-28
Identities = 276/347 (79%)
Strand = Plus / Plus
Query: 778 agtgcaccggagttctgtagtgttggtgatgattctcgtctcatactctgggatgcacga 837
||||||| |||||| ||||||||||| |||||||| ||||||| | |||||||||||
Sbjct: 14 agtgcacaggagttttgtagtgttggagatgattcctgtctcatcttatgggatgcacgt 73
Query: 838 gttggatcaactccagttgccaaggttgagaaggcgcatgatggagatcttcattgtgtt 897
||||| | | ||| || | |||||||| || || ||||||| |||||||| ||||||
Sbjct: 74 gttggctgtagtcctgtggtgaaggttgaaaaagctcatgatgctgatcttcactgtgtt 133
Query: 898 gattggaatcctcatgatataaattttattctgactggttctgctgataatacggttcac 957
|| |||||||| |||||| ||| | ||||| ||||| || || |||||| | ||||
Sbjct: 134 gactggaatccccatgatgataatctgattcttactggatcggcagataattctgttcgt 193
Query: 958 atgtttgatcgccggaaatttaacaatcgcggacttgggtctcctgttcataaatttaaa 1017
|||||||||||||| || | | | | ||| ||||| | ||| ||||||||||| |
Sbjct: 194 atgtttgatcgccgcaatctcacctctaatggagttggggcacctattcataaatttgag 253
Query: 1018 ggtcatgatgctgcagtcctctgtgtacagtggtgtcctgacaaatcatctgtatttgga 1077
||||| | ||||| || |||||||| ||||||| ||| |||||| ||||||||||||||
Sbjct: 254 ggtcacaaagctgctgttctctgtgttcagtggtctccagacaaagcatctgtatttgga 313
Query: 1078 agtgctgctgaagatggcattttgaacatctgggactatgagaaggt 1124
||| | || |||||||| | || |||||||||||||| ||||||||
Sbjct: 314 agttcagcagaagatggtctcttaaacatctgggactacgagaaggt 360
Score = 109 bits (55), Expect = 5e-23
Identities = 133/159 (83%)
Strand = Plus / Plus
Query: 1188 acatgctgggcatagggacaagattgttgacttccattggaatgcttctgagccatggac 1247
||||||||| ||||| ||||| | ||||||||||| |||||||| | ||| ||||||||
Sbjct: 421 acatgctggtcatagagacaaagtagttgacttccactggaatgcatatgatccatggac 480
Query: 1248 gattgttagtgtctctgatgattgtggaagtactggtggaggtggcaccctacagatatg 1307
|||||| ||||| |||||||| |||| ||||||||||||||| || || | ||||||||
Sbjct: 481 gattgtcagtgtgtctgatgactgtgaaagtactggtggagggggaacattgcagatatg 540
Query: 1308 gcggatgattgatctgatttatcgacctgaggaggaggt 1346
||| |||| ||| ||||| || | || |||||||||||
Sbjct: 541 gcgcatgagtgacctgatctacaggccagaggaggaggt 579
>gnl|LJGI|FS328729 weakly similar to UniRef100_A7R4J8 Cluster: Chromosome undetermined
scaffold_712, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_712,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (26%)
Length = 810
Score = 77.8 bits (39), Expect = 2e-13
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 358 aacagaatcagggaactcccgcaagatggtaagatagtagccacacacacagatagtccc 417
|||||||||| |||||||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 462 aacagaatcatggaactcccgcaagatagtaaggcagtagccaagcacacagatagtccc 521
Query: 418 aat 420
|||
Sbjct: 522 aat 524
>gnl|LJGI|TC77405 similar to UniRef100_A7QN12 Cluster: Chromosome undetermined
scaffold_129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_129,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (7%)
Length = 478
Score = 56.0 bits (28), Expect = 6e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 353 aggtgaacagaatcagggaactcccgcaagatggtaagatagtagccacacacacagata 412
|||| |||||||||| ||||||||| ||||| ||||| |||||||| |||||| |||
Sbjct: 62 aggtaaacagaatcatggaactcccagaagatagtaaggcagtagccaagcacacaaata 121
Query: 413 gtcccaat 420
||||||||
Sbjct: 122 gtcccaat 129
>gnl|LJGI|BP051713
Length = 444
Score = 54.0 bits (27), Expect = 2e-06
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 358 aacagaatcagggaactcccgcaagatggtaagatagtagccacacacacagatagtccc 417
|||||||||| ||||||||| ||||| ||||| |||||||| |||||| ||||||||
Sbjct: 395 aacagaatcatggaactcccagaagatagtaaggcagtagccaagcacacaaatagtccc 336
Query: 418 aat 420
|||
Sbjct: 335 aat 333