Miyakogusa Predicted Gene

Lj0g3v0060339.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0060339.1 Non Chatacterized Hit- tr|C0JP14|C0JP14_LOTJA
Putative basic helix-loop-helix protein BHLH9
OS=Lotus,97.92,2e-18,seg,NULL,CUFF.2674.1
         (288 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77685 similar to UniRef100_Q5ULY0 Cluster: Basic heli...   321   1e-87
gnl|LJGI|TC68549 similar to UniRef100_Q9FUA4 Cluster: Transcript...   293   3e-79

>gnl|LJGI|TC77685 similar to UniRef100_Q5ULY0 Cluster: Basic helix-loop-helix
           protein; n=1; Fragaria x ananassa|Rep: Basic
           helix-loop-helix protein - Fragaria ananassa
           (Strawberry), partial (45%)
          Length = 688

 Score =  321 bits (162), Expect = 1e-87
 Identities = 230/253 (90%), Gaps = 6/253 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccgaggaagatagctacaacctctcttcttcttcctcacaagacgaaatctccctt 60
           ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 119 atggcagaggaagatagctacaacctctcttcttcttcctcacaggacgaaatctccctt 178

                                                                       
Query: 61  ttcctccgtcagattcttctctgttcatcctcttcttccaaccccaatatgcctccatcc 120
           ||||||||||||||||||||| ||||||| ||      ||||||||| ||||||||||||
Sbjct: 179 ttcctccgtcagattcttctccgttcatcatc------caaccccaacatgcctccatcc 232

                                                                       
Query: 121 tcaaactcaccccttcattccaccgccggagcctttctctccgctccgcctcacccactg 180
           || ||||||||||||||| ||||||||||||||| |||||||||| |  |||| || |||
Sbjct: 233 tccaactcaccccttcataccaccgccggagcctatctctccgcttcatctcagcctctg 292

                                                                       
Query: 181 cctgctgcaaatgtgtcctcctcctctctaggtatcagtgagaacgaggctgatgaatat 240
           |||||||||||||| || ||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 293 cctgctgcaaatgtctcttcctcctctctaggtgtcagtgagaatgaggctgatgaatat 352

                        
Query: 241 gactgtgaaagtg 253
           |||||||||||||
Sbjct: 353 gactgtgaaagtg 365


>gnl|LJGI|TC68549 similar to UniRef100_Q9FUA4 Cluster: Transcription factor SPATULA;
           n=2; Arabidopsis thaliana|Rep: Transcription factor
           SPATULA - Arabidopsis thaliana (Mouse-ear cress),
           partial (18%)
          Length = 840

 Score =  293 bits (148), Expect = 3e-79
 Identities = 179/189 (94%), Gaps = 4/189 (2%)
 Strand = Plus / Plus

                                                                       
Query: 100 aaccccaatatgcctccatcctcaaactcaccccttcattccaccgccggagcctttctc 159
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 312 aaccccaatatgcctccatcctccaactcaccccttcattccaccgccggagcctttctc 371

                                                                       
Query: 160 tccgctccgcctcacccactgcctgctgcaaatgtgtcctcctcctctctaggtatcagt 219
           |||    |||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 372 tcc----cgcctcaccctctgcctactgcaaatgtgtcctcctcctctctaggtatcagt 427

                                                                       
Query: 220 gagaacgaggctgatgaatatgactgtgaaagtgtggtacatttgtttgatgatttctct 279
           ||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 428 gagaacgaggctggtgaatatgactgtgaaagtgaggtacatttgtttgttgatttctct 487

                    
Query: 280 gaatgaagg 288
           |||||||||
Sbjct: 488 gaatgaagg 496