Miyakogusa Predicted Gene
- Lj0g3v0060289.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0060289.1 Non Chatacterized Hit- tr|I1LB76|I1LB76_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4371
PE=,88.16,0,WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; SUBFAMILY NOT
NAMED,NULL;,NODE_3357_length_1889_cov_175.471146.path1.1
(1545 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77203 similar to UniRef100_Q2HW32 Cluster: Lissenceph... 1342 0.0
gnl|LJGI|TC63735 similar to UniRef100_Q2HW32 Cluster: Lissenceph... 1017 0.0
gnl|LJGI|BG662118 homologue to UniRef100_Q2HW32 Cluster: Lissenc... 771 0.0
gnl|LJGI|BW595831 similar to UniRef100_A8MR25 Cluster: Uncharact... 98 2e-19
gnl|LJGI|TC63678 similar to UniRef100_Q8H6S5 Cluster: CTV.2; n=1... 72 1e-11
gnl|LJGI|TC64360 similar to UniRef100_Q2HW32 Cluster: Lissenceph... 70 5e-11
>gnl|LJGI|TC77203 similar to UniRef100_Q2HW32 Cluster: Lissencephaly type-1-like
homology motif; CTLH, C-terminal to LisH motif; Nitrous
oxide reductase, N-terminal; WD40-like; Quinonprotein
alcohol dehydrogenase-like; n=1; Medicago truncatula|Rep:
Lissencephaly type-1-like homology motif; CTLH,
C-terminal to LisH motif; Nitrous oxide reductase,
N-terminal; WD40-like; Quinonprotein alcohol
dehydrogenase-like - Medicago truncatula (Barrel medic),
partial (31%)
Length = 1563
Score = 1342 bits (677), Expect = 0.0
Identities = 968/1065 (90%)
Strand = Plus / Plus
Query: 481 ggtgttggtattttggcccttggttcaaatggtatccagaagctttggaaatgggctcgc 540
|||| ||||||||||||||| |||||||||||||| ||||| |||||||||||| || |
Sbjct: 3 ggtgctggtattttggccctcggttcaaatggtatacagaaactttggaaatggcctttc 62
Query: 541 aatgaacacaatcctactgggaaggctaccgccagtgttgttccacaacagtggcaaccc 600
||| | || |||||| |||| |||||||| |||||||||||||||| ||| ||||||||
Sbjct: 63 aataatcagaatccttctggaaaggctacagccagtgttgttccacgacattggcaacca 122
Query: 601 aacagtggtcttcttatgactaatgatatctcaggtgtaaaccttgaagaagcggtccct 660
|||||||||||| ||||||||| | |||| ||||| |||||||||||||| ||||||
Sbjct: 123 cccagtggtcttctgatgactaatcaaatcttgggtgtcaaccttgaagaagcagtccct 182
Query: 661 tgcattgcactctcaaaaaatgactcatatgtcatgtctgcctgtggcggaaaggtttca 720
|||||||||||||||||||||||| ||||||| ||||| |||||||| |||||| |||||
Sbjct: 183 tgcattgcactctcaaaaaatgacacatatgtgatgtccgcctgtggtggaaagctttca 242
Query: 721 ctatttaacatgatgacattcaaggtaatgaccacatttatgcaaccacctcctgcatct 780
||||||||||| |||||||||||||||||| | |||||| |||||||| ||||||| |||
Sbjct: 243 ctatttaacataatgacattcaaggtaatggcgacatttttgcaaccatctcctgcctct 302
Query: 781 acctttctagctttccatcctcaggataacaacattattgccattgggatggaggattca 840
|||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 303 acctttctagctttccatccccaggataacaacattatagccattgggatggatgattca 362
Query: 841 accattcacatctataatgtcagagtggatgaggtgaaatcaaaattaaagggtcaccag 900
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 363 accattcacatctataatgtcagagtggctgaggtgaaatcaaaattgaagggtcaccag 422
Query: 901 aagcgaataactggtttggccttctcaaccaatcttaacatccttgtctcatctggtgct 960
|||||||| |||||||| ||||| |||||||||||| ||||||| || ||||||||||||
Sbjct: 423 aagcgaattactggtttagccttttcaaccaatcttcacatcctggtttcatctggtgct 482
Query: 961 gatgctcaactttgcgtgtggagcattgatacatgggagaaaagaaaatcaattccatta 1020
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 483 gatgctcaactttgtgtgtggagcattgatacatggaagaaaagaaaatcaattccatta 542
Query: 1021 caactacctgcgggaaggtcacctgttggtgatacacgggttcagttccattcggatcaa 1080
|||||||||||||||| ||||||||||||||||||| |||||| ||||||||| ||||||
Sbjct: 543 caactacctgcgggaaagtcacctgttggtgatacaggggttctgttccattcagatcaa 602
Query: 1081 cttcgcttattggtggtccatgagactcagttggcagtatatgatgccttaaagatggaa 1140
|||||||||||||| ||||||||||||| |||||| ||||||| |||| ||||||||
Sbjct: 603 cttcgcttattggtagtccatgagactccgttggctatatatgaggcctctaagatggat 662
Query: 1141 cgcattcggcagtgggttccccaagatgctctgtctgctcccatatcatgtgcagtttat 1200
|||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| ||||
Sbjct: 663 cgcattcgacagtgggttccccaagatgttctgtctgcccccatatcatgtgcagcttat 722
Query: 1201 tcttgcaacagtcagttaatatatgctacattttgcgatgcaaacgttggggttttcgat 1260
|| || |||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 723 tcctgtgacagtcagttaatatatgctacattttgcgatgcaaacattggagttttcgat 782
Query: 1261 gctgataccttgagactaagatgtcgaattgcaccatctgtatgcttgtcatctgctgct 1320
||||||| ||||||||| ||||||| || ||||| || ||||||||||||||||| |||
Sbjct: 783 gctgatagtttgagactacgatgtcgtatcgcaccttcagtatgcttgtcatctgccgct 842
Query: 1321 ttaagcggaaaccaggctgtgtatccttttgtggttgcgactcatccactagaacctaac 1380
|| || |||| ||| |||||||||||| |||||||||| || |||||||||||||||||
Sbjct: 843 ttgagtggaagccatgctgtgtatcctcttgtggttgcagctaatccactagaacctaac 902
Query: 1381 cagtttgctgttgggttaactgatgggtctgtcaaagtgatagaacctactgaatcagaa 1440
|||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 903 cagtttgcagttggtttaactgatgggtctgtcaaagtgatagaacccactgaatcagaa 962
Query: 1441 ggtaagtggggatcttctccacctgtggacaatggaatattgaatggtaggacagcttct 1500
|||||||||||||||| ||||||| ||||||| |||| ||||||||||||||||||||||
Sbjct: 963 ggtaagtggggatcttttccacctatggacaacggaaaattgaatggtaggacagcttct 1022
Query: 1501 tcatctacaacaagcaaccacactgccgatcaggcccaaagataa 1545
|||||||||||||||||||||||||| || ||||| ||| |||||
Sbjct: 1023 tcatctacaacaagcaaccacactgctgaccaggctcaatgataa 1067
>gnl|LJGI|TC63735 similar to UniRef100_Q2HW32 Cluster: Lissencephaly type-1-like
homology motif; CTLH, C-terminal to LisH motif; Nitrous
oxide reductase, N-terminal; WD40-like; Quinonprotein
alcohol dehydrogenase-like; n=1; Medicago truncatula|Rep:
Lissencephaly type-1-like homology motif; CTLH,
C-terminal to LisH motif; Nitrous oxide reductase,
N-terminal; WD40-like; Quinonprotein alcohol
dehydrogenase-like - Medicago truncatula (Barrel medic),
partial (15%)
Length = 685
Score = 1017 bits (513), Expect = 0.0
Identities = 513/513 (100%)
Strand = Plus / Plus
Query: 1033 ggaaggtcacctgttggtgatacacgggttcagttccattcggatcaacttcgcttattg 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaaggtcacctgttggtgatacacgggttcagttccattcggatcaacttcgcttattg 60
Query: 1093 gtggtccatgagactcagttggcagtatatgatgccttaaagatggaacgcattcggcag 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtggtccatgagactcagttggcagtatatgatgccttaaagatggaacgcattcggcag 120
Query: 1153 tgggttccccaagatgctctgtctgctcccatatcatgtgcagtttattcttgcaacagt 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgggttccccaagatgctctgtctgctcccatatcatgtgcagtttattcttgcaacagt 180
Query: 1213 cagttaatatatgctacattttgcgatgcaaacgttggggttttcgatgctgataccttg 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagttaatatatgctacattttgcgatgcaaacgttggggttttcgatgctgataccttg 240
Query: 1273 agactaagatgtcgaattgcaccatctgtatgcttgtcatctgctgctttaagcggaaac 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agactaagatgtcgaattgcaccatctgtatgcttgtcatctgctgctttaagcggaaac 300
Query: 1333 caggctgtgtatccttttgtggttgcgactcatccactagaacctaaccagtttgctgtt 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caggctgtgtatccttttgtggttgcgactcatccactagaacctaaccagtttgctgtt 360
Query: 1393 gggttaactgatgggtctgtcaaagtgatagaacctactgaatcagaaggtaagtgggga 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gggttaactgatgggtctgtcaaagtgatagaacctactgaatcagaaggtaagtgggga 420
Query: 1453 tcttctccacctgtggacaatggaatattgaatggtaggacagcttcttcatctacaaca 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcttctccacctgtggacaatggaatattgaatggtaggacagcttcttcatctacaaca 480
Query: 1513 agcaaccacactgccgatcaggcccaaagataa 1545
|||||||||||||||||||||||||||||||||
Sbjct: 481 agcaaccacactgccgatcaggcccaaagataa 513
>gnl|LJGI|BG662118 homologue to UniRef100_Q2HW32 Cluster: Lissencephaly type-1-like
homology motif; CTLH, C-terminal to LisH motif; Nitrous
oxide reductase, N-terminal; WD40-like; Quinonprotein
alcohol dehydrogenase-like; n=1; Medicago truncatula|Rep:
Lissencephaly type-1-like homology motif; CTLH,
C-terminal to LisH motif; Nitrous oxide reductase,
N-terminal; WD40-like; Quinonprotein alcohol
dehydrogenase-like - Medicago truncatula (Barrel medic),
partial (12%)
Length = 393
Score = 771 bits (389), Expect = 0.0
Identities = 392/393 (99%)
Strand = Plus / Plus
Query: 667 gcactctcaaaaaatgactcatatgtcatgtctgcctgtggcggaaaggtttcactattt 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcactctcaaaaaatgactcatatgtcatgtctgcctgtggcggaaaggtttcactattt 60
Query: 727 aacatgatgacattcaaggtaatgaccacatttatgcaaccacctcctgcatctaccttt 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacatgatgacattcaaggtaatgaccacatttatgcaaccacctcctgcatctaccttt 120
Query: 787 ctagctttccatcctcaggataacaacattattgccattgggatggaggattcaaccatt 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctagctttccatcctcaggataacaacattattgccattgggatggaggattcaaccatt 180
Query: 847 cacatctataatgtcagagtggatgaggtgaaatcaaaattaaagggtcaccagaagcga 906
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 cacatctataatgtcagagtggatgaggtgaaatcaaaattaaagggtcaccacaagcga 240
Query: 907 ataactggtttggccttctcaaccaatcttaacatccttgtctcatctggtgctgatgct 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ataactggtttggccttctcaaccaatcttaacatccttgtctcatctggtgctgatgct 300
Query: 967 caactttgcgtgtggagcattgatacatgggagaaaagaaaatcaattccattacaacta 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caactttgcgtgtggagcattgatacatgggagaaaagaaaatcaattccattacaacta 360
Query: 1027 cctgcgggaaggtcacctgttggtgatacacgg 1059
|||||||||||||||||||||||||||||||||
Sbjct: 361 cctgcgggaaggtcacctgttggtgatacacgg 393
>gnl|LJGI|BW595831 similar to UniRef100_A8MR25 Cluster: Uncharacterized protein
At1g80490.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At1g80490.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (13%)
Length = 486
Score = 97.6 bits (49), Expect = 2e-19
Identities = 166/205 (80%)
Strand = Plus / Plus
Query: 665 ttgcactctcaaaaaatgactcatatgtcatgtctgcctgtggcggaaaggtttcactat 724
||||||| || || ||||| || |||||||||||||| | ||| ||||| | || ||||
Sbjct: 282 ttgcactgtccaagaatgattcgtatgtcatgtctgcttctgggggaaaaatctccctat 341
Query: 725 ttaacatgatgacattcaaggtaatgaccacatttatgcaaccacctcctgcatctacct 784
| || ||||||||||||||| |||||| || || |||| |||||| || || |||| |
Sbjct: 342 tcaatatgatgacattcaagacaatgacaactttcatgccaccaccaccagctgctacat 401
Query: 785 ttctagctttccatcctcaggataacaacattattgccattgggatggaggattcaacca 844
|||| || || |||||||| || ||||| |||||||| ||||| |||||||| || ||||
Sbjct: 402 ttcttgcatttcatcctcaagacaacaatattattgctattggcatggaggactctacca 461
Query: 845 ttcacatctataatgtcagagtgga 869
|||| || |||||||| |||||||
Sbjct: 462 ttcaaatttataatgttcgagtgga 486
>gnl|LJGI|TC63678 similar to UniRef100_Q8H6S5 Cluster: CTV.2; n=1; Poncirus
trifoliata|Rep: CTV.2 - Poncirus trifoliata (Hardy
orange), partial (25%)
Length = 1206
Score = 71.9 bits (36), Expect = 1e-11
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 772 cctgcatctacctttctagctttccatcctcaggataacaacattattgccattgggatg 831
|||||| | |||||||| ||||||| ||||||||||||||| |||||||| || || |||
Sbjct: 124 cctgcagcaacctttcttgctttccgtcctcaggataacaatattattgctataggcatg 183
Query: 832 gaggattcaaccattcacatctataatgtcagagtggatgaggt 875
|| ||||| | ||||| || ||||||||| | || ||||||||
Sbjct: 184 gatgattcctctattcagatatataatgtccgtgttgatgaggt 227
>gnl|LJGI|TC64360 similar to UniRef100_Q2HW32 Cluster: Lissencephaly type-1-like
homology motif; CTLH, C-terminal to LisH motif; Nitrous
oxide reductase, N-terminal; WD40-like; Quinonprotein
alcohol dehydrogenase-like; n=1; Medicago
truncatula|Rep: Lissencephaly type-1-like homology
motif; CTLH, C-terminal to LisH motif; Nitrous oxide
reductase, N-terminal; WD40-like; Quinonprotein alcohol
dehydrogenase-like - Medicago truncatula (Barrel medic),
partial (18%)
Length = 982
Score = 69.9 bits (35), Expect = 5e-11
Identities = 117/143 (81%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 856 aatgtcagagtggatgaggtgaaatcaaaattaaagggtcaccagaagcgaataactggt 915
||||| || ||||||||||| |||| ||||| ||||||||||||||||| || || |||
Sbjct: 30 aatgttagggtggatgaggtcaaatacaaattgaagggtcaccagaagcgcattaccggt 89
Query: 916 ttggccttctcaaccaatcttaacatccttgtctcatctggtgctgatgctcaactttgc 975
|| | ||| | ||| |||| |||||| | || |||||| |||||||||||| ||||||
Sbjct: 90 ttag-ctttttaactcatctgaacatcttggtttcatcttctgctgatgctcagctttgc 148
Query: 976 gtgtggagcattgatacatggga 998
| ||||| |||||| |||||||
Sbjct: 149 ttttggagtattgattcatggga 171