Miyakogusa Predicted Gene

Lj0g3v0060079.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0060079.1 Non Chatacterized Hit- tr|D8R358|D8R358_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,32.39,2e-16,seg,NULL;
coiled-coil,NULL,NODE_76121_length_1262_cov_12.358954.path1.1
         (942 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59516 similar to UniRef100_A7R513 Cluster: Chromosome...  1068   0.0  
gnl|LJGI|FS358429                                                     404   e-112

>gnl|LJGI|TC59516 similar to UniRef100_A7R513 Cluster: Chromosome undetermined
           scaffold_831, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_831,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (33%)
          Length = 789

 Score = 1068 bits (539), Expect = 0.0
 Identities = 539/539 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtgaagaggttcatggagaagaagcccaaggcggcggggaccaggttgaccattccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atggtgaagaggttcatggagaagaagcccaaggcggcggggaccaggttgaccattccc 310

                                                                       
Query: 61  tgcgatgtgattgcccaggatctgaagaaggatgcgaagaaggttgcgggtttctctgcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tgcgatgtgattgcccaggatctgaagaaggatgcgaagaaggttgcgggtttctctgcg 370

                                                                       
Query: 121 ctgcagaagaagctgttcgggaaaggcacggcgtcgtcgtcggagaagaagaaggagaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ctgcagaagaagctgttcgggaaaggcacggcgtcgtcgtcggagaagaagaaggagaag 430

                                                                       
Query: 181 gtgaaggcattgactgaggtgaaggggaataccaggactctggctatggtgcttaggagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gtgaaggcattgactgaggtgaaggggaataccaggactctggctatggtgcttaggagt 490

                                                                       
Query: 241 gagagggagcttctcaatatcaataaggagcatgagatggagatttctcagctcaagcgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gagagggagcttctcaatatcaataaggagcatgagatggagatttctcagctcaagcgc 550

                                                                       
Query: 301 atgcttgaggacaagaataaagaggtggaaaagctgaaggatttgtgcttgaagcaaaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 atgcttgaggacaagaataaagaggtggaaaagctgaaggatttgtgcttgaagcaaaga 610

                                                                       
Query: 361 gaggaaatcaagtcgttgaagagtgcggtactcttcccggatgtgatgaattctcagctt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gaggaaatcaagtcgttgaagagtgcggtactcttcccggatgtgatgaattctcagctt 670

                                                                       
Query: 421 caagatcttgtggagaagcaaggctcagaattgaagcaggccaaacaggtcattccagct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 caagatcttgtggagaagcaaggctcagaattgaagcaggccaaacaggtcattccagct 730

                                                                      
Query: 481 cttcaacagcaggtttcttctctcactggtcagcttcaaagcctggcagaggatcttgc 539
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 cttcaacagcaggtttcttctctcactggtcagcttcaaagcctggcagaggatcttgc 789


>gnl|LJGI|FS358429 
          Length = 355

 Score =  404 bits (204), Expect = e-112
 Identities = 237/248 (95%)
 Strand = Plus / Minus

                                                                       
Query: 695 cctgcttaacaccttgcaatgtcaagtcaagatccagggaatttgagggtatgtgctctg 754
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 355 cctgcttaaccccttgcaatgtcaagtcaagatccagggaatttgagggtatgtgttttg 296

                                                                       
Query: 755 gctctctgcatgaggacagcttatctggggatgatgccaaaatatgtcctgtgttggatg 814
           ||| | |||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 295 gctttttgcatgaggacagcttttttggggatgatgccaaaatatgtcctgtgttggatg 236

                                                                       
Query: 815 attttagctcttatgatcagaagttttcaaagagttctgactcctgctatagctccaaca 874
           ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 235 attttagcttttatgatcagaagttttcaaagagttttgactcctgctatagctccaaca 176

                                                                       
Query: 875 aaataagcatcacttccaaagctggtaggagatctaatgagagaaaatcatccttatgga 934
           ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 175 aaataagcatcacttccaaagctggtaggagatttaatgagggaaaatcatccttatgga 116

                   
Query: 935 ggtagaat 942
           ||||||||
Sbjct: 115 ggtagaat 108