Miyakogusa Predicted Gene
- Lj0g3v0060059.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0060059.1 Non Chatacterized Hit- tr|I1MFQ5|I1MFQ5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27699
PE,86.07,0,Zinc-binding domain, present in Dystrophin,,Zinc finger,
ZZ-type; SANT SWI3, ADA2, N-CoR and TFIIIB,CUFF.2671.1
(1674 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AW719598 similar to UniRef100_A7R7E0 Cluster: Chromosom... 870 0.0
gnl|LJGI|FS346525 weakly similar to UniRef100_A7R7E0 Cluster: Ch... 680 0.0
gnl|LJGI|FS319656 homologue to UniRef100_Q75LL6 Cluster: Transcr... 295 5e-79
gnl|LJGI|TC58613 similar to UniRef100_A7R4U9 Cluster: Chromosome... 78 2e-13
>gnl|LJGI|AW719598 similar to UniRef100_A7R7E0 Cluster: Chromosome undetermined
scaffold_1717, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1717,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (30%)
Length = 439
Score = 870 bits (439), Expect = 0.0
Identities = 439/439 (100%)
Strand = Plus / Plus
Query: 831 ctcaggaaatgaaggtccttctttagtagaagcaagtggttttaacgcaaaaagacagga 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcaggaaatgaaggtccttctttagtagaagcaagtggttttaacgcaaaaagacagga 60
Query: 891 atttgatcctgaatatgataatgacgctgaacaactactagctgaaatggaatttaagga 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atttgatcctgaatatgataatgacgctgaacaactactagctgaaatggaatttaagga 120
Query: 951 caatgacaccgaggaagagcgggagataaaattacgtgtcttgcgtttatattcaaaaag 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caatgacaccgaggaagagcgggagataaaattacgtgtcttgcgtttatattcaaaaag 180
Query: 1011 gcttgatgaaagaaagcgtaggaaggatttcatacttgaaagaaatttgttatacccaaa 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcttgatgaaagaaagcgtaggaaggatttcatacttgaaagaaatttgttatacccaaa 240
Query: 1071 tccatttgagaaggatttaactcctgaggagaaggcaatatgtcggagatatgacttatt 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccatttgagaaggatttaactcctgaggagaaggcaatatgtcggagatatgacttatt 300
Query: 1131 catgcgctttcactctaaggaagatcacctggaattgcttagaacagctatttctgaaca 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 catgcgctttcactctaaggaagatcacctggaattgcttagaacagctatttctgaaca 360
Query: 1191 cagaacttttagaagacttcaagagcttaaggaagcccgggctgctggttgccgcacttc 1250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagaacttttagaagacttcaagagcttaaggaagcccgggctgctggttgccgcacttc 420
Query: 1251 agctgaagcagaaagatat 1269
|||||||||||||||||||
Sbjct: 421 agctgaagcagaaagatat 439
>gnl|LJGI|FS346525 weakly similar to UniRef100_A7R7E0 Cluster: Chromosome undetermined
scaffold_1717, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1717,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (17%)
Length = 729
Score = 680 bits (343), Expect = 0.0
Identities = 343/343 (100%)
Strand = Plus / Minus
Query: 1332 gcaggttggcccaagcagtcaggcggttccaaatgcattaatgtctccagactctactgg 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 gcaggttggcccaagcagtcaggcggttccaaatgcattaatgtctccagactctactgg 670
Query: 1392 caaggatataagcgtgagacctgccacttcaagctctgtcaatgaaatcgatgtaaccgg 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 caaggatataagcgtgagacctgccacttcaagctctgtcaatgaaatcgatgtaaccgg 610
Query: 1452 atactacggagcagatttactttctgaacctgagaaacgcttatgctgcgagctaaggtt 1511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 atactacggagcagatttactttctgaacctgagaaacgcttatgctgcgagctaaggtt 550
Query: 1512 gcctccagcggtgtatctaaagatgcaagagcaactgtctgtacaaatgattgctggcaa 1571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gcctccagcggtgtatctaaagatgcaagagcaactgtctgtacaaatgattgctggcaa 490
Query: 1572 tgtctctacaaaatcagatgctcaccaattattcaagatggacaccttcaaaattgacag 1631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tgtctctacaaaatcagatgctcaccaattattcaagatggacaccttcaaaattgacag 430
Query: 1632 ggtgtatgatatgctcattaaaaagggatttggttcaccctga 1674
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ggtgtatgatatgctcattaaaaagggatttggttcaccctga 387
>gnl|LJGI|FS319656 homologue to UniRef100_Q75LL6 Cluster: Transcriptional adapter
ADA2; n=1; Oryza sativa Japonica Group|Rep:
Transcriptional adapter ADA2 - Oryza sativa subsp.
japonica (Rice), partial (4%)
Length = 452
Score = 295 bits (149), Expect = 5e-79
Identities = 176/185 (95%)
Strand = Plus / Plus
Query: 3 gggtcgttctcgagggaattttcagcacgccgatgaggaccccaaccaaaggtccaggag 62
||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 268 gggtcgttcccgagggaattttcagcaccccaatgaggaccccaaccaaaggtccaggaa 327
Query: 63 aaaaaagaatgctgccagtggtgaaaatttagaatctggagctgcaggtcaaggagtaag 122
|||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 328 aaaaaaaaatgctgccaggggtgaaaatttaaaatctggagctgcaggtcaaggagtaag 387
Query: 123 tgaggggggaaagaaagctctgtatcactgcaattattgtaataaagatatttcagggaa 182
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 388 tgaggggggaaaaaaagctctgtatcactgcaattattgtaataaaaatatttcagggaa 447
Query: 183 aatcc 187
|||||
Sbjct: 448 aatcc 452
>gnl|LJGI|TC58613 similar to UniRef100_A7R4U9 Cluster: Chromosome undetermined
scaffold_783, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_783,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (87%)
Length = 780
Score = 77.8 bits (39), Expect = 2e-13
Identities = 186/235 (79%)
Strand = Plus / Plus
Query: 140 ctctgtatcactgcaattattgtaataaagatatttcagggaaaatccgtattaaatgtg 199
||||||||||||| |||||||| | ||||||||||||||||| || || || || ||||
Sbjct: 159 ctctgtatcactgtaattattgccacaaagatatttcagggaagattcgcataaagtgtg 218
Query: 200 ccatgtgcccggattttgacttatgtatagagtgcttttctgttggagctgaggtgacac 259
| | || | |||||||| | || ||||||||||| ||||| || | || |||||||
Sbjct: 219 ctgtctgtcaagattttgatctctgcatagagtgcttctctgtcggtgtagaagtgacac 278
Query: 260 ctcacaaaagcaatcacccttacagggttatggataatttgtctttccctcttatttgcc 319
|||||||| | ||||| || || | ||||||||||| | || || || ||||| || |
Sbjct: 279 ctcacaaatgtaatcatccatatcgaattatggataatctatcgtttccacttatatgtc 338
Query: 320 cggactggaatgcagatgatgaaattttgcttctagagggaattgaaatgtatgg 374
| || |||||||||||||| || || || ||||||||||| |||| || ||||||
Sbjct: 339 cagattggaatgcagatgaagagatgttacttctagagggtattggaacgtatgg 393