Miyakogusa Predicted Gene

Lj0g3v0059989.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0059989.1 Non Chatacterized Hit- tr|I1L023|I1L023_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37699
PE,85.74,0,ZF_SWIM,Zinc finger, SWIM-type; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; FAR1,FAR1 DNA bindi,CUFF.2665.1
         (2085 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68568 weakly similar to UniRef100_A7Q8L4 Cluster: Chr...    62   1e-08

>gnl|LJGI|TC68568 weakly similar to UniRef100_A7Q8L4 Cluster: Chromosome chr5
            scaffold_64, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr5 scaffold_64, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (31%)
          Length = 1132

 Score = 61.9 bits (31), Expect = 1e-08
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1732 tcttgcaaagaatttgagtcctcaggaatattatgcagacatgctcttcgtgtatttgtg 1791
            ||||||||||||||||| |  || ||||||||||| ||||||||| |||| ||| |||||
Sbjct: 1028 tcttgcaaagaatttgaattttctggaatattatgtagacatgctattcgagtacttgtg 1087

                       
Query: 1792 ttgaagaatta 1802
             |||| |||||
Sbjct: 1088 atgaaaaatta 1098