Miyakogusa Predicted Gene

Lj0g3v0059869.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0059869.1 tr|F5AIA8|F5AIA8_HELAN More axillary branches 2
(Fragment) OS=Helianthus annuus PE=4 SV=1,35.47,2e-18,Liste_lipo_26:
bacterial surface protein 26-residu,Bacterial surface protein
26-residue repeat; Leuc,CUFF.2651.1
         (1531 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66636 similar to UniRef100_Q208P4 Cluster: RAMOSUS4; ...   720   0.0  
gnl|LJGI|BW631619 similar to UniRef100_Q208P4 Cluster: RAMOSUS4;...    54   3e-06

>gnl|LJGI|TC66636 similar to UniRef100_Q208P4 Cluster: RAMOSUS4; n=1; Pisum
           sativum|Rep: RAMOSUS4 - Pisum sativum (Garden pea),
           partial (18%)
          Length = 768

 Score =  720 bits (363), Expect = 0.0
 Identities = 366/367 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcactcacctcgacctctcattactctccccgtggggctacgagctcttccgcaccg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 atgtcactcacctcgacctctcattactctccccgtggggctacgagctcttccgcaccg 461

                                                                       
Query: 61  actccgagtcccaactccccaccgattccaagccccaactccttgctctccgactccgcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 actccgagtcccaactccccaccgattccaagccccaactccttgctctccgactccgcc 521

                                                                       
Query: 121 gcgccttccctcacgtcgcctcactcaccctctacgccctcctcccgatcacgctccacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gcgccttccctcacgtcgcctcactcaccctctacgccctcctcccgatcacgctccacc 581

                                                                       
Query: 181 tcctcctactttcctggccggagctccgccgcgttaagctcgtccgatggcacgagcgcg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tcctcctactttcctggccggagctccgccgcgttaagctcgtccgatggcacgagcgcg 641

                                                                       
Query: 241 cgcccgctgatctcttcagaatccgaattcgacggcctcttcgagcattgccggtcgctc 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 cgcccgctgacctcttcagaatccgaattcgacggcctcttcgagcattgccggtcgctc 701

                                                                       
Query: 301 acctcgctggacctctccagcttctacgactggagcacctggaacctcctttcggcgctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 acctcgctggacctctccagcttctacgactggagcacctggaacctcctttcggcgctg 761

                  
Query: 361 aaatcaa 367
           |||||||
Sbjct: 762 aaatcaa 768


>gnl|LJGI|BW631619 similar to UniRef100_Q208P4 Cluster: RAMOSUS4; n=1; Pisum
            sativum|Rep: RAMOSUS4 - Pisum sativum (Garden pea),
            partial (19%)
          Length = 460

 Score = 54.0 bits (27), Expect = 3e-06
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1075 ctcagagctttggagcccattcggggccgggtggagcggcttcatgtggactgtgtctgg 1134
            ||||||||| |||| || || |||| |||| | ||||||||||||||||| || || |||
Sbjct: 366  ctcagagctctggaccctatccgggaccggattgagcggcttcatgtggattgcgtgtgg 425

                       
Query: 1135 agtggcttgaa 1145
            | |||||||||
Sbjct: 426  aatggcttgaa 436