Miyakogusa Predicted Gene

Lj0g3v0059679.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0059679.1 CUFF.2644.1
         (2253 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82040 similar to UniRef100_Q8H1A3 Cluster: Mini-chrom...  1283   0.0  

>gnl|LJGI|TC82040 similar to UniRef100_Q8H1A3 Cluster: Mini-chromosome maintenance
           protein MCM6; n=1; Pisum sativum|Rep: Mini-chromosome
           maintenance protein MCM6 - Pisum sativum (Garden pea),
           partial (26%)
          Length = 668

 Score = 1283 bits (647), Expect = 0.0
 Identities = 647/647 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagcttatggcggttacatggtggacgagaaagccgttagggttgaaaacgctttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22  atggaagcttatggcggttacatggtggacgagaaagccgttagggttgaaaacgctttc 81

                                                                       
Query: 61  ttagaatttctcaaaagtttcaggacgaatcggaacgagctctgctacgaatcggagatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82  ttagaatttctcaaaagtttcaggacgaatcggaacgagctctgctacgaatcggagatt 141

                                                                       
Query: 121 gaagtgatgaaagccaatgaatccaacactatgttcatcgatttcgaccatgtcagtaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gaagtgatgaaagccaatgaatccaacactatgttcatcgatttcgaccatgtcagtaaa 201

                                                                       
Query: 181 ttcagtaatcaccttggtgaagctatcttcgatgaatatttgaggtttgagccttttttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttcagtaatcaccttggtgaagctatcttcgatgaatatttgaggtttgagccttttttg 261

                                                                       
Query: 241 aagaatgcttgtttgagattcgtcatggagctgaagccgacgttcatttctgatgataac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aagaatgcttgtttgagattcgtcatggagctgaagccgacgttcatttctgatgataac 321

                                                                       
Query: 301 cctaacaaggacatcaatattgctttctacaaccttccacatgtcaagcggttaagggaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cctaacaaggacatcaatattgctttctacaaccttccacatgtcaagcggttaagggaa 381

                                                                       
Query: 361 ttggctacatcagaaatcgggaagcttgtatcggtgaccggagtggtaacaaggacaagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttggctacatcagaaatcgggaagcttgtatcggtgaccggagtggtaacaaggacaagc 441

                                                                       
Query: 421 gaggttcgaccggagcttctccaagggactttcaagtgcctggaatgtggtggtgttatc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gaggttcgaccggagcttctccaagggactttcaagtgcctggaatgtggtggtgttatc 501

                                                                       
Query: 481 aagaatgttgagcagcaattcaaatactctgagccaactatatgtgttaatgcgacttgt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aagaatgttgagcagcaattcaaatactctgagccaactatatgtgttaatgcgacttgt 561

                                                                       
Query: 541 aacaacagaactaagtgggcgctgctgcgccaggagagcaaatttgctgactggcaaagg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aacaacagaactaagtgggcgctgctgcgccaggagagcaaatttgctgactggcaaagg 621

                                                          
Query: 601 gtcagaatgcaggagacatccaaagagatacctgcaggctctttgcc 647
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gtcagaatgcaggagacatccaaagagatacctgcaggctctttgcc 668