Miyakogusa Predicted Gene
- Lj0g3v0059669.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0059669.1 Non Chatacterized Hit- tr|I1HZ89|I1HZ89_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,28.15,1e-18,no
description,Bromodomain; BROMODOMAIN_2,Bromodomain;
BROMODOMAIN-CONTAINING PROTEIN,NULL; FALZ-REL,CUFF.2667.1
(1233 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57475 similar to UniRef100_A7QNQ9 Cluster: Chromosome... 182 3e-45
gnl|LJGI|TC79117 weakly similar to UniRef100_A7QNQ9 Cluster: Chr... 133 3e-30
>gnl|LJGI|TC57475 similar to UniRef100_A7QNQ9 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (58%)
Length = 1237
Score = 182 bits (92), Expect = 3e-45
Identities = 286/348 (82%), Gaps = 2/348 (0%)
Strand = Plus / Plus
Query: 444 gggaatgcaagagctcatgcaccggtttgaaacaatattggatgagataactcaggatag 503
||||||||| ||||| |||| || |||| ||||||||| | |||| |||||| |||
Sbjct: 317 gggaatgcaggagctaatgcgccagttttccacaatattgcgtcagattactcagcataa 376
Query: 504 atgggctgaacccttcttggaacctgtagatgttaagggtcttga-cttgtatgactatt 562
||||||| || || |||||||||||||||| || |||||||| |||| | |||||||
Sbjct: 377 atgggcttggccttttctggaacctgtagatgtaaaaggtcttgagcttg-acgactatt 435
Query: 563 atgagattattgagaagcctatggatttcagcacaataagaagaaaaatggatgccaagg 622
||||| ||||||| ||||| ||||||||||| ||||||| ||| |||||||| || |||
Sbjct: 436 atgaggttattgataagcccatggatttcagtacaataaaaagtaaaatggaagctgagg 495
Query: 623 atggctctggttataagaacgtgcgggagatatattctgatgtccggttgatttttaaga 682
|||| |||| |||||||| || ||||||||||| | ||||| ||||||| |||||||
Sbjct: 496 atggaactggatataagaatgtacgggagatatacgcagatgtaaggttgatatttaaga 555
Query: 683 atgcaatgaaatataatgacagaaaacatgatatccatgttatggcgaagaacttgctgg 742
||||||||||||| || | |||||||||| | ||||| ||||| |||| |||||| |
Sbjct: 556 atgcaatgaaatacaacaatgaaaaacatgatgttcatgtgatggcaaagaccttgctag 615
Query: 743 agaaatttgagaagaaatggctgcaacttttgcctaaagttgttgagg 790
| ||||||||| | |||||||||||||| || |||||||||| |||||
Sbjct: 616 aaaaatttgaggaaaaatggctgcaactcttacctaaagttgctgagg 663
Score = 159 bits (80), Expect = 5e-38
Identities = 205/244 (84%), Gaps = 2/244 (0%)
Strand = Plus / Plus
Query: 911 atctcaaagcaatggtgattgaaaattgcaggaaactgtcagctcaagagaaagtaacgc 970
||||||||| |||||||||| | || |||||||||||||| |||||||||| || |
Sbjct: 793 atctcaaagaaatggtgattcagaaatgcaggaaactgtctcctcaagagaagagaatac 852
Query: 971 ttgggacagctctcaccaaattgtctcatgaaaacctcatgagggcaatgcagataattt 1030
||||| ||||||||||||| ||||||||| ||||||||| |||||| || ||||| ||
Sbjct: 853 ttgggtcagctctcaccaagttgtctcatcaaaacctcaacagggcattggagatagttg 912
Query: 1031 ctgagaacaacccaaacttccagccagatgttgaagaggtgaaccttgacattgatgctc 1090
||||||| ||||||| |||||| | || |||||||||| ||||||||||||||||||
Sbjct: 913 ctgagaataacccaatcttccaatctagtggtgaagaggtggaccttgacattgatgctc 972
Query: 1091 agagtgattacacactgtggagattaaatatttttgctaaaag-tgcactagaggttcaa 1149
|||| || |||||||| ||||| ||||| |||||| |||||| ||||||||| | ||||
Sbjct: 973 agagcgactacacactatggaggttaaaggtttttg-taaaagatgcactagaagctcaa 1031
Query: 1150 ggaa 1153
||||
Sbjct: 1032 ggaa 1035
>gnl|LJGI|TC79117 weakly similar to UniRef100_A7QNQ9 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(17%)
Length = 722
Score = 133 bits (67), Expect = 3e-30
Identities = 180/215 (83%), Gaps = 2/215 (0%)
Strand = Plus / Plus
Query: 940 aggaaactgtcagctcaagagaaagtaacgcttgggacagctctcaccaaattgtctcat 999
||||||||||| |||||||||| || |||||| ||||||||||||| |||||||||
Sbjct: 158 aggaaactgtctcctcaagagaagagaatacttgggtcagctctcaccaagttgtctcat 217
Query: 1000 gaaaacctcatgagggcaatgcagataatttctgagaacaacccaaacttccagccagat 1059
||||||||| |||||| || ||||| || ||||||| ||||||| |||||| | |
Sbjct: 218 caaaacctcaacagggcattggagatagttgctgagaataacccaatcttccaatctagt 277
Query: 1060 gttgaagaggtgaaccttgacattgatgctcagagtgattacacactgtggagattaaat 1119
| |||||||||| |||||||||||||||||||||| || |||||||| ||||| |||||
Sbjct: 278 ggtgaagaggtggaccttgacattgatgctcagagcgactacacactatggaggttaaag 337
Query: 1120 atttttgctaaaag-tgcactagaggttcaaggaa 1153
|||||| |||||| ||||||||| | ||||||||
Sbjct: 338 gtttttg-taaaagatgcactagaagctcaaggaa 371