Miyakogusa Predicted Gene

Lj0g3v0059609.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0059609.1 Non Chatacterized Hit- tr|I1L116|I1L116_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,60.2,0,ZF_CW,Zinc
finger, CW-type; zf-CW,Zinc finger, CW-type; ZINC ION BINDING,NULL;
ZINC FINGER CW-TYPE C,CUFF.2656.1
         (4473 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO012674 weakly similar to UniRef100_A7NW54 Cluster: Ch...   202   1e-50

>gnl|LJGI|GO012674 weakly similar to UniRef100_A7NW54 Cluster: Chromosome chr5
           scaffold_2, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (6%)
          Length = 665

 Score =  202 bits (102), Expect = 1e-50
 Identities = 245/292 (83%), Gaps = 3/292 (1%)
 Strand = Plus / Plus

                                                                       
Query: 570 aatttatagtggccttgggcttgatgactctccatcttcctcaatggggaatagccctgc 629
           |||||||||||| ||||| |||||| |||||||||| || ||||||||||| ||||||| 
Sbjct: 265 aatttatagtggacttggacttgataactctccatcatcatcaatggggaacagccctga 324

                                                                       
Query: 630 ggaaagtgaaggcattctacctgtatctcaacagaaagctgaagattctccaaccagcat 689
           ||| ||||||| ||| | |||| ||||| || ||||  ||||||| |||||||| |||||
Sbjct: 325 ggagagtgaagtcatgccacctatatctaaagagaaccctgaagaatctccaactagcat 384

                                                                       
Query: 690 tattcaggttatgacttctttaactgtccctgggggtgttctaatatcacctctacatga 749
           | ||| ||||||||| || || ||| ||||||| || || ||||||||||||||||||||
Sbjct: 385 tgttcgggttatgacatccttcactatccctggcggcgtgctaatatcacctctacatga 444

                                                                       
Query: 750 aagtttgctcaacttgataaaaactgaaaaagttattgaagacatcagacgtatgtcctc 809
            ||| ||||| |||||   ||||  ||||| ||| |   ||||| ||||| |||||| ||
Sbjct: 445 cagtctgctctacttg---aaaaaggaaaaggttctaagagacagcagacctatgtcttc 501

                                                               
Query: 810 tcttaatggtcatgaagaaccttgttccatgtctactgatgaatcggattct 861
           ||||| ||||||| |||||| |||||||||||||||||||||||| ||||||
Sbjct: 502 tcttagtggtcatcaagaacattgttccatgtctactgatgaatcagattct 553