Miyakogusa Predicted Gene

Lj0g3v0059359.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0059359.1 Non Chatacterized Hit- tr|I1MN94|I1MN94_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52310
PE,66.28,0,seg,NULL; put_zinc_LRP1: putative zinc finger domain, LRP1
t,Zinc finger, lateral root primordium ty,CUFF.2620.1
         (972 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS350628 similar to UniRef100_A7QE40 Cluster: Chromosom...    76   5e-13

>gnl|LJGI|FS350628 similar to UniRef100_A7QE40 Cluster: Chromosome chr4 scaffold_83,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_83, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (22%)
          Length = 508

 Score = 75.8 bits (38), Expect = 5e-13
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                       
Query: 873 tggggcacttgttgatccttcctccttgtatccatctccggttaacgccttcatgacagg 932
           ||||||| |||| |||||||| |||||||||||  ||||  ||||||| |||||| | | 
Sbjct: 301 tggggcaattgtcgatccttcttccttgtatccggctccccttaacgcattcatgcctgc 242

                                                 
Query: 933 tagtggtacgcaattcttccctcgcacaagatcttgaa 970
           ||||||||||||||||||||| | | ||||| ||||||
Sbjct: 241 tagtggtacgcaattcttcccccacccaagaccttgaa 204



 Score = 65.9 bits (33), Expect = 4e-10
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 678 aacggctgtcaacataggagggcatgtcttcaaaggaatcctctatgactatggtccaga 737
           ||||||||||||||| ||||| |||||||||| |||||| || |||||| |||| |||||
Sbjct: 466 aacggctgtcaacattggaggccatgtcttcagaggaattctttatgaccatgggccaga 407

            
Query: 738 c 738
           |
Sbjct: 406 c 406