Miyakogusa Predicted Gene

Lj0g3v0059259.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0059259.1 Non Chatacterized Hit- tr|D7SP48|D7SP48_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,34.07,3e-17,coiled-coil,NULL,CUFF.2628.1
         (396 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71782 similar to UniRef100_A7QE44 Cluster: Chromosome...   785   0.0  

>gnl|LJGI|TC71782 similar to UniRef100_A7QE44 Cluster: Chromosome chr4 scaffold_83,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_83, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (21%)
          Length = 885

 Score =  785 bits (396), Expect = 0.0
 Identities = 396/396 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtgaatgattactggaaaggtcactgtcacttagttggatatcagcctcttaatttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 atggtgaatgattactggaaaggtcactgtcacttagttggatatcagcctcttaatttc 289

                                                                       
Query: 61  aaatcacaaaatgtgcaaaaagaaacgcagattcgacaatcagctgggcgctccactaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aaatcacaaaatgtgcaaaaagaaacgcagattcgacaatcagctgggcgctccactaat 349

                                                                       
Query: 121 acacagaatgtgcatcaagatgatctgtacatagatcagacaattgcgggtgctacatcg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 acacagaatgtgcatcaagatgatctgtacatagatcagacaattgcgggtgctacatcg 409

                                                                       
Query: 181 acaggaactccagggcctgtagctgttgataaaaataaaatctgtgaagaaaacatacaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 acaggaactccagggcctgtagctgttgataaaaataaaatctgtgaagaaaacatacaa 469

                                                                       
Query: 241 cttttcatgaagtgtgaggagttcaggaaaaaggaaacggagttgaaacagacggttgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 cttttcatgaagtgtgaggagttcaggaaaaaggaaacggagttgaaacagacggttgag 529

                                                                       
Query: 301 aacttggaggaggatttgaaagatcttcaaaggaaatgtaggcaactttctgcattcttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aacttggaggaggatttgaaagatcttcaaaggaaatgtaggcaactttctgcattcttg 589

                                               
Query: 361 gtggctaagaagaagcagaagagtagttcttaaagt 396
           ||||||||||||||||||||||||||||||||||||
Sbjct: 590 gtggctaagaagaagcagaagagtagttcttaaagt 625