Miyakogusa Predicted Gene
- Lj0g3v0058969.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0058969.1 Non Chatacterized Hit- tr|I1L3L8|I1L3L8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,43.14,5e-17,ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT
CLPX,Clp protease, ATP-binding subunit ClpX; HSL AND ,CUFF.2633.1
(1704 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82758 similar to UniRef100_Q9LTA9 Cluster: CLP protea... 1003 0.0
gnl|LJGI|BP060969 similar to UniRef100_Q56X21 Cluster: CLP prote... 492 e-138
gnl|LJGI|DC594164 similar to UniRef100_A7QCD6 Cluster: Chromosom... 442 e-123
>gnl|LJGI|TC82758 similar to UniRef100_Q9LTA9 Cluster: CLP protease regulatory subunit
CLPX-like; n=1; Arabidopsis thaliana|Rep: CLP protease
regulatory subunit CLPX-like - Arabidopsis thaliana
(Mouse-ear cress), partial (35%)
Length = 1064
Score = 1003 bits (506), Expect = 0.0
Identities = 506/506 (100%)
Strand = Plus / Plus
Query: 522 agattcccctttgccgccaacgcccaaacagattttcaatgccctcaatcaatttgttgt 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agattcccctttgccgccaacgcccaaacagattttcaatgccctcaatcaatttgttgt 618
Query: 582 gggtcaggaaaagcctaaaaagctgctttcggtcgctgtttacaaccactatatcaggtt 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gggtcaggaaaagcctaaaaagctgctttcggtcgctgtttacaaccactatatcaggtt 678
Query: 642 acgccttgcaacaactcagcctgagtctcaatcttccgatcaagacactgatttggttca 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 acgccttgcaacaactcagcctgagtctcaatcttccgatcaagacactgatttggttca 738
Query: 702 gcctgaaaaaagtaacgtcttgctcatcggtcccactggctcagggaagaccttgctcgc 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gcctgaaaaaagtaacgtcttgctcatcggtcccactggctcagggaagaccttgctcgc 798
Query: 762 caaaacgcttgcccggattgtcaatgttccatttgccattgctgatgctaccactttcac 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 caaaacgcttgcccggattgtcaatgttccatttgccattgctgatgctaccactttcac 858
Query: 822 gcaggctggttatgttggagaagatgttgagtcaatattatataagcttcttgtggaagc 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 gcaggctggttatgttggagaagatgttgagtcaatattatataagcttcttgtggaagc 918
Query: 882 tgatttcgacgtggaattagctcagcgagggattgtctacgttgatgaagttgataagat 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 tgatttcgacgtggaattagctcagcgagggattgtctacgttgatgaagttgataagat 978
Query: 942 tactaagaagggagaaagtttgaacattggaagggatgtatctggggagggggtccagca 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 tactaagaagggagaaagtttgaacattggaagggatgtatctggggagggggtccagca 1038
Query: 1002 ggccttgctcaaaatgctggaaagca 1027
||||||||||||||||||||||||||
Sbjct: 1039 ggccttgctcaaaatgctggaaagca 1064
Score = 442 bits (223), Expect = e-123
Identities = 223/223 (100%)
Strand = Plus / Plus
Query: 234 cggtgatggtattgtttactacgaccacataagagccgacatgaactgccctcgttgctc 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cggtgatggtattgtttactacgaccacataagagccgacatgaactgccctcgttgctc 330
Query: 294 cagaaacatgtctgtcatcttctccaaccgacccttatccatttctggtcaccaaccggg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cagaaacatgtctgtcatcttctccaaccgacccttatccatttctggtcaccaaccggg 390
Query: 354 tctctatcaggccctcaatctctgcccctcttgcaaaaccgccttctacttcagacccct 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tctctatcaggccctcaatctctgcccctcttgcaaaaccgccttctacttcagacccct 450
Query: 414 caagctctctcctcttcacggcactttcatcgagatcgcaagg 456
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 caagctctctcctcttcacggcactttcatcgagatcgcaagg 493
Score = 317 bits (160), Expect = 1e-85
Identities = 160/160 (100%)
Strand = Plus / Plus
Query: 40 cacccaattgtaaggagaagcaggctcatcgcctcgttcttattccactataactactac 99
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 cacccaattgtaaggagaagcaggctcatcgcctcgttcttattccactataactactac 136
Query: 100 tactatccttcttccaaaattctcagtaacaacatcaaccacagtggcagtaatccccat 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tactatccttcttccaaaattctcagtaacaacatcaaccacagtggcagtaatccccat 196
Query: 160 tcaaattcaacaaattcagggtatcagcggcgacacaagt 199
||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tcaaattcaacaaattcagggtatcagcggcgacacaagt 236
>gnl|LJGI|BP060969 similar to UniRef100_Q56X21 Cluster: CLP protease regulatory subunit
CLPX-like; n=2; Arabidopsis thaliana|Rep: CLP protease
regulatory subunit CLPX-like - Arabidopsis thaliana
(Mouse-ear cress), partial (30%)
Length = 462
Score = 492 bits (248), Expect = e-138
Identities = 263/268 (98%)
Strand = Plus / Minus
Query: 1437 tttcactgataatgctttgagattgattgcaaagaaagctatggcaaagaacactggtgc 1496
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 462 tttcactgataatgctttgagattgattgccaagaaagctatggccaagaacactggtgc 403
Query: 1497 tcgtggtttaagagccttattagaaaacattcttaccgaagcgatgtttgaggtccccga 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tcgtggtttaagagccttattagaaaacattcttaccgaagcgatgtttgaggtccccga 343
Query: 1557 caaggctgatattggtaacatcgaaggggttctggttgatgaagaggctgttgggtcact 1616
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ccaggctgatattggtaacatcgaaggggttctggttgatgaagaggctgttgggtcact 283
Query: 1617 gaacggacatggatgtggagcaaaaatactatacagagataataatggctcattggaggg 1676
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gaacggacatggatgtggagccaaaatactatacagagataataatggctcattggaggg 223
Query: 1677 tcaagcaagagccatatgtttgtaaatg 1704
|||||| |||||||||||||||||||||
Sbjct: 222 tcaagccagagccatatgtttgtaaatg 195
>gnl|LJGI|DC594164 similar to UniRef100_A7QCD6 Cluster: Chromosome undetermined
scaffold_77, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_77, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 564
Score = 442 bits (223), Expect = e-123
Identities = 223/223 (100%)
Strand = Plus / Plus
Query: 234 cggtgatggtattgtttactacgaccacataagagccgacatgaactgccctcgttgctc 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cggtgatggtattgtttactacgaccacataagagccgacatgaactgccctcgttgctc 303
Query: 294 cagaaacatgtctgtcatcttctccaaccgacccttatccatttctggtcaccaaccggg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cagaaacatgtctgtcatcttctccaaccgacccttatccatttctggtcaccaaccggg 363
Query: 354 tctctatcaggccctcaatctctgcccctcttgcaaaaccgccttctacttcagacccct 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tctctatcaggccctcaatctctgcccctcttgcaaaaccgccttctacttcagacccct 423
Query: 414 caagctctctcctcttcacggcactttcatcgagatcgcaagg 456
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 caagctctctcctcttcacggcactttcatcgagatcgcaagg 466
Score = 317 bits (160), Expect = 1e-85
Identities = 160/160 (100%)
Strand = Plus / Plus
Query: 40 cacccaattgtaaggagaagcaggctcatcgcctcgttcttattccactataactactac 99
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 cacccaattgtaaggagaagcaggctcatcgcctcgttcttattccactataactactac 109
Query: 100 tactatccttcttccaaaattctcagtaacaacatcaaccacagtggcagtaatccccat 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tactatccttcttccaaaattctcagtaacaacatcaaccacagtggcagtaatccccat 169
Query: 160 tcaaattcaacaaattcagggtatcagcggcgacacaagt 199
||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tcaaattcaacaaattcagggtatcagcggcgacacaagt 209
Score = 89.7 bits (45), Expect = 5e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 522 agattcccctttgccgccaacgcccaaacagattttcaatgccct 566
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 agattcccctttgccgccaacgcccaaacagattttcaatgccct 564