Miyakogusa Predicted Gene
- Lj0g3v0058909.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0058909.1 Non Chatacterized Hit- tr|G7JRR8|G7JRR8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,80.61,0,seg,NULL; coiled-coil,NULL; DUF647,Protein of
unknown function DUF647; SUBFAMILY NOT NAMED,NULL; FAM,CUFF.2637.1
(1491 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58288 similar to UniRef100_A7QCD7 Cluster: Chromosome... 1324 0.0
gnl|LJGI|TC78957 similar to UniRef100_A7QCD7 Cluster: Chromosome... 801 0.0
gnl|LJGI|BP042155 homologue to UniRef100_A9BNS0 Cluster: DEAD/DE... 341 8e-93
>gnl|LJGI|TC58288 similar to UniRef100_A7QCD7 Cluster: Chromosome undetermined
scaffold_77, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_77, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (29%)
Length = 781
Score = 1324 bits (668), Expect = 0.0
Identities = 682/689 (98%)
Strand = Plus / Plus
Query: 1 atggctcccaatccttatcccatgaatcccatgaatctgaatctcagttccaacaagtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 atggctcccaatccttatcccatgaatcccatgaatctgaatctcagttccaacaagtca 152
Query: 61 ccctcctccacggccaccaccaccataccaccatcctctcaggagattctcgtccgcgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 ccctcctccacggccaccaccaccataccaccatcctctcaggagattctcgtccgcgaa 212
Query: 121 acgctgcgtatcagcgccaatttggcctccccgctcctcgaacccaccaccaggttgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 acgctgcgtatcagcgccaatttggcctccccgctcctcgaacccaccaccaggttgatt 272
Query: 181 tgctgcgaggaaatcgacggccgccgctgggactatctcgctgagactgattcctccggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tgctgcgaggaaatcgacggccgccgctgggactatctcgctgagactgattcctccggc 332
Query: 241 caattcaagaagaattcatttcgctctctcaccttgcaaacccctcaacctccaatcgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 caattcaagaagaattcatttcgctctctcaccttgcaaacccctcaacctccaatcgat 392
Query: 301 ggactgatttcattcgtgagatcctatgttgttcctgaaggtttccctgacagtgttacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggactgatttcattcgtgagatcctatgttgttcctgaaggtttccctgacagtgttacc 452
Query: 361 ccttcgtacgtgccgtacatgacatggagggcattaaaacacttcttcggtggagcaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ccttcgtacgtgccgtacatgacatggagggcattaaaacacttcttcggtggagcaatg 512
Query: 421 ggcgttttcactactcaaacccttttgacttcagttggcgtctctagaaacacagccact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ggcgttttcactactcaaacccttttgacttcagttggcgtctctagaaacacagccact 572
Query: 481 cctggtgctgtagctatcaactggattctcaaggatggtgctggtcgtgtgggaaagatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 cctggtgctgtagctatcaactggattctcaaggatggtgctggtcgtgtgggaaagatg 632
Query: 541 ctttttgcacgccaaggnnnnnnntttgattatgatctcaaacagctgcgctttgcaggt 600
||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 633 ctttttgcacgccaaggaaaaaaatttgattatgatctcaaacagctgcgctttgcaggt 692
Query: 601 gatcttctcatggagctgggtgccggagtggaactggcaactgctgcagtgccacatcta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gatcttctcatggagctgggtgccggagtggaactggcaactgctgcagtgccacatcta 752
Query: 661 tttcttcctttggcttgtgctgctaatgt 689
|||||||||||||||||||||||||||||
Sbjct: 753 tttcttcctttggcttgtgctgctaatgt 781
>gnl|LJGI|TC78957 similar to UniRef100_A7QCD7 Cluster: Chromosome undetermined
scaffold_77, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_77, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(22%)
Length = 945
Score = 801 bits (404), Expect = 0.0
Identities = 415/418 (99%), Gaps = 3/418 (0%)
Strand = Plus / Plus
Query: 1074 atcaagaatcaaggaggcattccgagaccctagtgcatatgttgccatagagcccctgtt 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcaagaatcaaggaggcattccgagaccctagtgcatatgttgccatagagcccctgtt 60
Query: 1134 cgataaggagaggtatattgtgacatatgacccttcaaaatataaggtctatgctgtgct 1193
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgat---gagaggtatattgtgacatatgacccttcaaaatataaggtctatgctgtgct 117
Query: 1194 gaaggctcaggcgaagtcagacgatattctaaaagcagcattccacgctcacgtgctctt 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gaaggctcaggcgaagtcagacgatattctaaaagcagcattccacgctcacgtgctctt 177
Query: 1254 gagtttcataaaatcatcgaatgaaaataaggtctcatctcagaagcaaagggaggatct 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gagtttcataaaatcatcgaatgaaaataaggtctcatctcagaagcaaagggaggatct 237
Query: 1314 taactcaaatgtgatgctcacagttgctgatcttgaggcttgtattgctgattcttgcaa 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 taactcaaatgtgatgctcacagttgctgatcttgaggcttgtattgctgattcttgcaa 297
Query: 1374 ggtcgtggcaaattcttatgggcttttcaagaataaagctaaggagcagggttgggctat 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ggtcgtggcaaattcttatgggcttttcaagaataaagctaaggagcagggttgggctat 357
Query: 1434 gtcagaatcacttttaaatcctggtcgagctaggctgtgtcaacttgataatagatga 1491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gtcagaatcacttttaaatcctggtcgagctaggctgtgtcaacttgataatagatga 415
>gnl|LJGI|BP042155 homologue to UniRef100_A9BNS0 Cluster: DEAD/DEAH box helicase
domain protein; n=1; Delftia acidovorans SPH-1|Rep:
DEAD/DEAH box, partial (2%)
Length = 411
Score = 341 bits (172), Expect = 8e-93
Identities = 172/172 (100%)
Strand = Plus / Minus
Query: 1 atggctcccaatccttatcccatgaatcccatgaatctgaatctcagttccaacaagtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 atggctcccaatccttatcccatgaatcccatgaatctgaatctcagttccaacaagtca 113
Query: 61 ccctcctccacggccaccaccaccataccaccatcctctcaggagattctcgtccgcgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 ccctcctccacggccaccaccaccataccaccatcctctcaggagattctcgtccgcgaa 53
Query: 121 acgctgcgtatcagcgccaatttggcctccccgctcctcgaacccaccacca 172
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 acgctgcgtatcagcgccaatttggcctccccgctcctcgaacccaccacca 1