Miyakogusa Predicted Gene

Lj0g3v0058809.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0058809.1 Non Chatacterized Hit- tr|J9NB56|J9NB56_FUSO4
Uncharacterized protein OS=Fusarium oxysporum f. sp.
l,31.58,1.7,seg,NULL,CUFF.2589.1
         (342 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS357027 homologue to UniRef100_Q9BBS8 Cluster: DNA-dir...   167   6e-41
gnl|LJGI|FS356216                                                      56   1e-07
gnl|LJGI|BP033532 similar to UniRef100_UPI0000EB118D Cluster: MI...    50   9e-06

>gnl|LJGI|FS357027 homologue to UniRef100_Q9BBS8 Cluster: DNA-directed RNA polymerase
           subunit beta'; n=1; Lotus japonicus|Rep: DNA-directed
           RNA polymerase subunit beta' - Lotus japonicus, partial
           (11%)
          Length = 639

 Score =  167 bits (84), Expect = 6e-41
 Identities = 115/123 (93%), Gaps = 3/123 (2%)
 Strand = Plus / Plus

                                                                       
Query: 20  cgcacatgcgtggtcttcaccagtttt-ttcagcagctttgtaactccctttcccacaat 78
           |||||||||||||   ||| ||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 510 cgcacatgcgtggc--tcagcagttttcttcagcaactttgtaactccctttcccacaat 567

                                                                       
Query: 79  tatcattgctcattactttgccttcaaccatcatcattagccatcaagagtctatcaaac 138
            |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 568 catcattgctcattactttgccttcaaccatcatcattagccatcaaaagtctatcaaac 627

              
Query: 139 ctg 141
           |||
Sbjct: 628 ctg 630


>gnl|LJGI|FS356216 
          Length = 563

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 87  ctcattactttgccttcaaccatcatcattagccat 122
           |||||||||| ||||||||||||||||||| |||||
Sbjct: 508 ctcattacttggccttcaaccatcatcatttgccat 543


>gnl|LJGI|BP033532 similar to UniRef100_UPI0000EB118D Cluster: MICAL C-terminal-like
           protein.; n=1; Canis lupus familiaris|Rep: MICAL
           C-terminal-like protein. - Canis familiaris, partial
           (4%)
          Length = 517

 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                       
Query: 258 atcaacactcataatctcacaaagtttcagtttaagtctgaccaaaagaataaaccccaa 317
           |||||| |||||| || |||||  |||||| | || ||||| || |||||| |||| |||
Sbjct: 368 atcaactctcatattcacacaagatttcagctcaaatctgaacataagaattaacctcaa 309

                        
Query: 318 actaaaactaata 330
           |||||||||||||
Sbjct: 308 actaaaactaata 296