Miyakogusa Predicted Gene
- Lj0g3v0058489.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0058489.1 Non Chatacterized Hit- tr|I1JJ41|I1JJ41_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24483
PE,90.26,0,seg,NULL; COG5,Conserved oligomeric Golgi complex, subunit
5; SUBFAMILY NOT NAMED,NULL; CONSERVED OL,CUFF.2624.1
(2502 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67530 similar to UniRef100_A7PJU6 Cluster: Chromosome... 549 e-155
gnl|LJGI|TC64279 similar to UniRef100_A7PJU7 Cluster: Chromosome... 517 e-145
gnl|LJGI|TC63340 similar to UniRef100_A7PJU7 Cluster: Chromosome... 72 2e-11
>gnl|LJGI|TC67530 similar to UniRef100_A7PJU6 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 670
Score = 549 bits (277), Expect = e-155
Identities = 277/277 (100%)
Strand = Plus / Plus
Query: 2226 gccaccaaacgtcatacttcatcatctatatacgcgtggtcctgaagatttgcagtcacc 2285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccaccaaacgtcatacttcatcatctatatacgcgtggtcctgaagatttgcagtcacc 60
Query: 2286 actgcaaagaaacaaactaacaccattgcagtattcattgtggctagattctcaagggga 2345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actgcaaagaaacaaactaacaccattgcagtattcattgtggctagattctcaagggga 120
Query: 2346 ggatcaaatctggaagggcatcaaagcaacacttgatgattatgctataaatgtgaggag 2405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggatcaaatctggaagggcatcaaagcaacacttgatgattatgctataaatgtgaggag 180
Query: 2406 cagaggagataaggagtttagccctgtttatcctcttatgcttcaattgggttcaacgtt 2465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagaggagataaggagtttagccctgtttatcctcttatgcttcaattgggttcaacgtt 240
Query: 2466 aactgaaaagattcaagcttcctcaaagccttgattg 2502
|||||||||||||||||||||||||||||||||||||
Sbjct: 241 aactgaaaagattcaagcttcctcaaagccttgattg 277
>gnl|LJGI|TC64279 similar to UniRef100_A7PJU7 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (55%)
Length = 720
Score = 517 bits (261), Expect = e-145
Identities = 261/261 (100%)
Strand = Plus / Plus
Query: 430 atcgctacaaaaacctcccagctctccaacctccaccgaaccaccgagctcctccagcac 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 atcgctacaaaaacctcccagctctccaacctccaccgaaccaccgagctcctccagcac 519
Query: 490 tccgtccgcgccctccgcctctccaagaagctccgcgacctcatggcagccgcagatccg 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tccgtccgcgccctccgcctctccaagaagctccgcgacctcatggcagccgcagatccg 579
Query: 550 gaaaagctcgacctcgccaaggccgcgcagttccactccgagatcctgagcctctgcgac 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gaaaagctcgacctcgccaaggccgcgcagttccactccgagatcctgagcctctgcgac 639
Query: 610 gagtacgacctcgccggcattgacgccgtcgatgaggagctccggtgggtgagggagagc 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gagtacgacctcgccggcattgacgccgtcgatgaggagctccggtgggtgagggagagc 699
Query: 670 ggggaccggttgcgaagcgaa 690
|||||||||||||||||||||
Sbjct: 700 ggggaccggttgcgaagcgaa 720
Score = 287 bits (145), Expect = 2e-76
Identities = 145/145 (100%)
Strand = Plus / Plus
Query: 1 atggcctcaccagcggcggcgaggtcgccggcgtccaccgtcgcttctccgatccaacgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 atggcctcaccagcggcggcgaggtcgccggcgtccaccgtcgcttctccgatccaacgc 90
Query: 61 ctctccactttcaaaaacccctccaccgccaccccattcgccgccaccgcatcctccgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 ctctccactttcaaaaacccctccaccgccaccccattcgccgccaccgcatcctccgca 150
Query: 121 ctcgattccctagcctccgatccca 145
|||||||||||||||||||||||||
Sbjct: 151 ctcgattccctagcctccgatccca 175
Score = 121 bits (61), Expect = 2e-26
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 233 agaagctccacaacgcgatccgcctcctcgagaatcagctccgctccgaggtgctttccc 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agaagctccacaacgcgatccgcctcctcgagaatcagctccgctccgaggtgctttccc 322
Query: 293 g 293
|
Sbjct: 323 g 323
>gnl|LJGI|TC63340 similar to UniRef100_A7PJU7 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 749
Score = 71.9 bits (36), Expect = 2e-11
Identities = 94/112 (83%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 588 cgagatcctgagcctctgcgacgagtacgacctcgccggcattgacgccgtcgatgagga 647
||||||| | ||||||||| ||| |||||| | |||||||| || |||||||| |||||
Sbjct: 242 cgagatcttaagcctctgcaacgggtacgattt-gccggcatcgatgccgtcgacgagga 184
Query: 648 gctccggtgggtgagggagagcggggaccggttgcgaagcgaagcaatgaag 699
|||||| ||||||||||| || ||||||| |||| | ||| |||||| ||||
Sbjct: 183 gctccgatgggtgagggaaagtggggaccagttgaggagcaaagcaacgaag 132