Miyakogusa Predicted Gene

Lj0g3v0058349.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0058349.1 tr|Q8LKL1|Q8LKL1_9MARC Tubulin gamma chain
OS=Conocephalum japonicum GN=gtb1 PE=3
SV=1,100,0.000000000000007,Tubulin_C,Tubulin/FtsZ, 2-layer sandwich
domain; no description,Tubulin/FtsZ, 2-layer sandwich
domai,NODE_65609_length_100_cov_42.970001.path1.1
         (126 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79627 homologue to UniRef100_Q8GZT0 Cluster: Gamma-tu...   248   6e-66
gnl|LJGI|TC65392 homologue to UniRef100_Q8GZT0 Cluster: Gamma-tu...   135   7e-32

>gnl|LJGI|TC79627 homologue to UniRef100_Q8GZT0 Cluster: Gamma-tubulin; n=1; Lupinus
           albus|Rep: Gamma-tubulin - Lupinus albus (White lupin),
           partial (53%)
          Length = 1126

 Score =  248 bits (125), Expect = 6e-66
 Identities = 125/125 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagaagacttctgcaggcaaaaaacattatggtttcttcttatgcacggaccaaagat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 atgagaagacttctgcaggcaaaaaacattatggtttcttcttatgcacggaccaaagat 278

                                                                       
Query: 61  gctagccaagctaaatatatatcaattctgaatatcatccaaggagaggttgatccaact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gctagccaagctaaatatatatcaattctgaatatcatccaaggagaggttgatccaact 338

                
Query: 121 caggt 125
           |||||
Sbjct: 339 caggt 343


>gnl|LJGI|TC65392 homologue to UniRef100_Q8GZT0 Cluster: Gamma-tubulin; n=1; Lupinus
           albus|Rep: Gamma-tubulin - Lupinus albus (White lupin),
           partial (34%)
          Length = 1063

 Score =  135 bits (68), Expect = 7e-32
 Identities = 74/76 (97%)
 Strand = Plus / Plus

                                                                       
Query: 50  ggaccaaagatgctagccaagctaaatatatatcaattctgaatatcatccaaggagagg 109
           |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2   ggacgaaagatgctagccaagcaaaatatatatcaattctgaatatcatccaaggagagg 61

                           
Query: 110 ttgatccaactcaggt 125
           ||||||||||||||||
Sbjct: 62  ttgatccaactcaggt 77