Miyakogusa Predicted Gene
- Lj0g3v0057049.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0057049.1 Non Chatacterized Hit- tr|F6HH77|F6HH77_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,91.82,0,no
description,Kelch repeat type 1; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; no
description,,NODE_1766_length_1918_cov_107.471848.path1.1
(1290 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76203 similar to UniRef100_A7PF14 Cluster: Chromosome... 870 0.0
gnl|LJGI|TC81027 similar to UniRef100_A7PF14 Cluster: Chromosome... 803 0.0
gnl|LJGI|TC60410 similar to UniRef100_Q93W93 Cluster: F-box/Kelc... 78 2e-13
gnl|LJGI|TC63313 similar to UniRef100_Q93W93 Cluster: F-box/Kelc... 56 6e-07
>gnl|LJGI|TC76203 similar to UniRef100_A7PF14 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 1070
Score = 870 bits (439), Expect = 0.0
Identities = 439/439 (100%)
Strand = Plus / Plus
Query: 852 gccagagaatgatagctggtaccctgtttatgatggaatggtttctggctggaggaaccc 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccagagaatgatagctggtaccctgtttatgatggaatggtttctggctggaggaaccc 60
Query: 912 tagcactaccctaaatggacagctctatgccttagactgcaaggatggctgcaaacttag 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagcactaccctaaatggacagctctatgccttagactgcaaggatggctgcaaacttag 120
Query: 972 agtttatgatgagggtagtgattcatggagcaagcatattgacagtaaaatgcatttggg 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtttatgatgagggtagtgattcatggagcaagcatattgacagtaaaatgcatttggg 180
Query: 1032 gaactcgcgggccttggaggctgctgctcttgtccctctcaatggaaaactatgtatcat 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaactcgcgggccttggaggctgctgctcttgtccctctcaatggaaaactatgtatcat 240
Query: 1092 ccggaataatatgagcatttccctggttgatgtctcaaaaatagaagatttgaaaggatc 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccggaataatatgagcatttccctggttgatgtctcaaaaatagaagatttgaaaggatc 300
Query: 1152 ttctgctgaacagttatgggaaacgattgccggtaaaggacagttcaagaccttggtcac 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttctgctgaacagttatgggaaacgattgccggtaaaggacagttcaagaccttggtcac 360
Query: 1212 caatctttggtctagtctcgccgggagaaaccgactcaaaagtcacatagttcactgtca 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caatctttggtctagtctcgccgggagaaaccgactcaaaagtcacatagttcactgtca 420
Query: 1272 ggttcttcaagcttagagg 1290
|||||||||||||||||||
Sbjct: 421 ggttcttcaagcttagagg 439
>gnl|LJGI|TC81027 similar to UniRef100_A7PF14 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 1011
Score = 803 bits (405), Expect = 0.0
Identities = 405/405 (100%)
Strand = Plus / Plus
Query: 1 atggacagagttattcaacctcctttggttgatacgactgcatgtttatgcagagtagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 atggacagagttattcaacctcctttggttgatacgactgcatgtttatgcagagtagat 666
Query: 61 acaggcctgaaaactgttgctggggcaaggaggtatgtccctggaacaaagctttgtctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 acaggcctgaaaactgttgctggggcaaggaggtatgtccctggaacaaagctttgtctt 726
Query: 121 cggcctgacattaaaccgtccattcacccaactagaagcaagccggcacgcggtgaccga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 cggcctgacattaaaccgtccattcacccaactagaagcaagccggcacgcggtgaccga 786
Query: 181 agccgcaatcaatcccctctacttcctggactccctgatgatcttgctattgcttgccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 agccgcaatcaatcccctctacttcctggactccctgatgatcttgctattgcttgccta 846
Query: 241 attcgagtcccacgggttgatcaccgtaaacttcggctagtctgcaaaagatggtatcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 attcgagtcccacgggttgatcaccgtaaacttcggctagtctgcaaaagatggtatcgt 906
Query: 301 cttttggttggtaacttcttttattctctccgcaagagtcttggaatttcagaagagtgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 cttttggttggtaacttcttttattctctccgcaagagtcttggaatttcagaagagtgg 966
Query: 361 atatatgtcattaagagagaccgagatgggaaaatctcgtggcat 405
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 atatatgtcattaagagagaccgagatgggaaaatctcgtggcat 1011
>gnl|LJGI|TC60410 similar to UniRef100_Q93W93 Cluster: F-box/Kelch-repeat protein
At1g55270; n=1; Arabidopsis thaliana|Rep:
F-box/Kelch-repeat protein At1g55270 - Arabidopsis
thaliana (Mouse-ear cress), partial (41%)
Length = 805
Score = 77.8 bits (39), Expect = 2e-13
Identities = 250/319 (78%), Gaps = 1/319 (0%)
Strand = Plus / Plus
Query: 205 cctggactccctgatgatcttgctattgcttgcctaattcgagtcccacgggttgatcac 264
||||| || ||||||||||||||||||||||| | ||||| || || ||||||| |||
Sbjct: 488 cctggtcttcctgatgatcttgctattgcttgtttgattcgtgtacccagggttgagcac 547
Query: 265 cgtaaacttcggctagtctgcaaaagatggtatcgtcttttggttggtaacttcttttat 324
| ||||| || | || ||||| |||||||| || || || ||| || ||||| |||
Sbjct: 548 aggaaactgcgtttggtttgcaagagatggtaccgcctcctgtctggaaatttcttctat 607
Query: 325 tctctccgcaagagtcttggaatttcagaagagtggatatatgtcattaagagagaccga 384
|| ||| | || ||||||||||| ||||||| ||| | |||||||| || ||||||||
Sbjct: 608 tcgctcaggaaaagtcttggaatggcagaagaatgggtttatgtcatcaa-agagaccgt 666
Query: 385 gatgggaaaatctcgtggcatgcttttgatcctgtgtaccaattatggcagcccctgcct 444
|| || | ||| || | ||||||||||||||| | |||||| ||||||| |||| ||
Sbjct: 667 gagggaagaatttcattgcatgcttttgatcccatttaccaactatggcaatcccttccg 726
Query: 445 cctgttcctaaggaatattctggagctcttggttttggctgtgctgttctcaatgggtgc 504
||||||||| ||||||||||| ||| | || ||| ||||||| ||||| | ||| ||
Sbjct: 727 cctgttcctggggaatattctgaagcattgggatttagctgtgccgttcttagtggttgt 786
Query: 505 cacctctacctgtttggcg 523
||| | ||| |||||||||
Sbjct: 787 cacttgtacttgtttggcg 805
Score = 60.0 bits (30), Expect = 4e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 54 agtagatacaggcctgaaaactgttgctggggcaagga 91
||||||| ||||||||||||| ||||||||||||||||
Sbjct: 343 agtagattcaggcctgaaaacagttgctggggcaagga 380
>gnl|LJGI|TC63313 similar to UniRef100_Q93W93 Cluster: F-box/Kelch-repeat protein
At1g55270; n=1; Arabidopsis thaliana|Rep:
F-box/Kelch-repeat protein At1g55270 - Arabidopsis
thaliana (Mouse-ear cress), partial (25%)
Length = 698
Score = 56.0 bits (28), Expect = 6e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1252 agtcacatagttcactgtcaggttcttcaagc 1283
|||||||| |||||||||||||||||||||||
Sbjct: 312 agtcacattgttcactgtcaggttcttcaagc 343
Score = 54.0 bits (27), Expect = 2e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 1051 gctgctgctcttgtccctctcaatggaaaactatgtatcatccggaataatatgagcat 1109
|||||||||||||| || || |||||||| ||||| || ||||| || |||||||||||
Sbjct: 114 gctgctgctcttgttccccttaatggaaagctatgcattatccgcaacaatatgagcat 172