Miyakogusa Predicted Gene
- Lj0g3v0056799.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0056799.2 Non Chatacterized Hit- tr|I3SKC9|I3SKC9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,42.68,4e-18,no
description,NULL; F-box domain,F-box domain, cyclin-like; FBOX,F-box
domain, cyclin-like; A Recep,CUFF.2500.2
(474 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75420 similar to UniRef100_A7QK60 Cluster: Chromosome... 428 e-119
gnl|LJGI|TC71561 similar to UniRef100_A2Q1U7 Cluster: Cyclin-lik... 174 3e-43
>gnl|LJGI|TC75420 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 514
Score = 428 bits (216), Expect = e-119
Identities = 219/220 (99%)
Strand = Plus / Plus
Query: 1 atggttgataggatcagcgctttgccagacgaaatgctccaccacattctgtcatttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 atggttgataggatcagcgctttgccagacgaaatgctccaccacattctgtcatttctc 354
Query: 61 ccaacggaaaacgccgtcgccaccggagttctttcaaagagatggacccatctctggcgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ccaacggaaaacgccgtcgccaccggagttctttcaaagagatggacccatctctggcgc 414
Query: 121 tcagttcccgttctcgacttgtcaaccatcagaatggttccaagagacgttgatgacaac 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tcagttcccattctcgacttgtcaaccatcagaatggttccaagagacgttgatgacaac 474
Query: 181 agtttcttcttcagcgatcgtgtctactctgttcttctcc 220
||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 agtttcttcttcagcgatcgtgtctactctgttcttctcc 514
>gnl|LJGI|TC71561 similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD; n=1;
Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (18%)
Length = 485
Score = 174 bits (88), Expect = 3e-43
Identities = 283/346 (81%), Gaps = 9/346 (2%)
Strand = Plus / Plus
Query: 1 atggttgataggatcagcgctttgccagacgaaatgctccaccacattctgtcatttctc 60
||||| ||||||||||||||||| || |||||||| || ||||||||| || ||||||
Sbjct: 66 atggtcgataggatcagcgctttaccggacgaaatcatctgccacattctatcgtttctc 125
Query: 61 ccaacggaaaacgccgtcgccaccggagttctttcaaagagatggacccatctctggcgc 120
|| |||||||||||||||||||||| || || |||||||||||||||||||||||||||
Sbjct: 126 ccgacggaaaacgccgtcgccaccgccgtcctctcaaagagatggacccatctctggcgc 185
Query: 121 tcagttcccgttctcgacttgtcaaccatcagaatggttccaagagacgttgatgacaac 180
|||||| ||| ||||||||| || || ||||||| || | || |||||| ||
Sbjct: 186 tcagtttccgctctcgacttctcctccgtcagaat-gtac-----gaacccgatgaccac 239
Query: 181 agtttcttcttcagcgatcgtgtctactctgttcttctccttcgcgacgccgcttcaccc 240
|||||||||||||||| |||||||| ||||||||| ||||| |||||||| | |||
Sbjct: 240 cgtttcttcttcagcgacatcgtctactcggttcttctctttcgcaacgccgctaccccc 299
Query: 241 atcaaatcgttcacccttgagcttgataatgatgttgc---cactcgtctagacattgcc 297
|||||| |||| ||| || |||||| |||||||||| | || ||| ||||| |||
Sbjct: 300 atcaaaaaattcagcctcgaacttgatgatgatgttgctgtcgctaatcttgacatagcc 359
Query: 298 aatgttagcaaatgggtcaactttgtcacacaatgcagatttggag 343
||| || |||||||||||| |||||||| ||||||||| ||||||
Sbjct: 360 aatattcacaaatgggtcaattttgtcacgcaatgcagagttggag 405