Miyakogusa Predicted Gene
- Lj0g3v0056389.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0056389.1 Non Chatacterized Hit- tr|C6T9A5|C6T9A5_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,82.81,0,AUX_IAA,AUX/IAA protein; FAMILY NOT NAMED,NULL; seg,NULL;
IAA_ARF,Aux/IAA-ARF-dimerisation; CAD &
PB,NODE_35381_length_562_cov_558.902161.path1.1
(576 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58187 similar to UniRef100_P13089 Cluster: Auxin-indu... 1142 0.0
gnl|LJGI|TC61787 homologue to UniRef100_P13089 Cluster: Auxin-in... 301 3e-81
gnl|LJGI|TC58188 homologue to UniRef100_A7NWZ8 Cluster: Chromoso... 165 4e-40
gnl|LJGI|TC66393 similar to UniRef100_A5H273 Cluster: IAA6; n=1;... 157 9e-38
gnl|LJGI|BW597272 similar to UniRef100_Q38825 Cluster: Auxin-res... 92 5e-18
gnl|LJGI|TC70921 similar to UniRef100_Q0PH24 Cluster: Auxin-regu... 92 5e-18
gnl|LJGI|BP049007 homologue to UniRef100_A7QVQ0 Cluster: Chromos... 80 2e-14
gnl|LJGI|TC59414 similar to UniRef100_Q8LSK7 Cluster: Auxin-regu... 78 7e-14
gnl|LJGI|TC70802 similar to UniRef100_A7PEL3 Cluster: Chromosome... 70 2e-11
gnl|LJGI|TC69855 similar to UniRef100_P32294 Cluster: Auxin-indu... 70 2e-11
gnl|LJGI|TC64632 homologue to UniRef100_O24542 Cluster: Auxin-in... 68 7e-11
gnl|LJGI|TC74334 homologue to UniRef100_O22465 Cluster: GH1 prot... 62 4e-09
gnl|LJGI|TC74104 similar to UniRef100_A9YWR0 Cluster: GH1 protei... 62 4e-09
gnl|LJGI|TC75082 homologue to UniRef100_P13089 Cluster: Auxin-in... 60 2e-08
gnl|LJGI|AV780093 similar to UniRef100_A8IXW6 Cluster: Indoleace... 56 2e-07
>gnl|LJGI|TC58187 similar to UniRef100_P13089 Cluster: Auxin-induced protein AUX28;
n=1; Glycine max|Rep: Auxin-induced protein AUX28 -
Glycine max (Soybean), partial (87%)
Length = 1297
Score = 1142 bits (576), Expect = 0.0
Identities = 576/576 (100%)
Strand = Plus / Plus
Query: 1 atgagaaagagaggattctctgaaactgagtcgactgagactgaagaaacagcaaccact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgagaaagagaggattctctgaaactgagtcgactgagactgaagaaacagcaaccact 324
Query: 61 actgtggatctgatgcttaacctttcccctaaagaagcttcttctgcttcggctgctgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actgtggatctgatgcttaacctttcccctaaagaagcttcttctgcttcggctgctgct 384
Query: 121 ggtggggcagatccacgtgataagcttaagacttcttcgcctaaggagaacaccctgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtggggcagatccacgtgataagcttaagacttcttcgcctaaggagaacaccctgctg 444
Query: 181 gtctctgattctgccaagcctcctcctgctaaggcgcaagtggtgggttggccaccagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtctctgattctgccaagcctcctcctgctaaggcgcaagtggtgggttggccaccagtt 504
Query: 241 cggtcgttccggaagaacatgtttgcggcccaaaagagcagcggagatcaagagagcgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cggtcgttccggaagaacatgtttgcggcccaaaagagcagcggagatcaagagagcgag 564
Query: 301 aagaacagcagccctaatgcaagctttgtgaaagtgagcatggatggagcaccttacctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagaacagcagccctaatgcaagctttgtgaaagtgagcatggatggagcaccttacctc 624
Query: 361 cgcaaagtggacttgagcatgtacaagacttacaaagatctctctgatgccttaggcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cgcaaagtggacttgagcatgtacaagacttacaaagatctctctgatgccttaggcaaa 684
Query: 421 atgtttagctccttcaccattggaaattgcgagtcccaaggcattaaggatttcatgaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atgtttagctccttcaccattggaaattgcgagtcccaaggcattaaggatttcatgaat 744
Query: 481 gagagtaagttgatggatcttttgaactccgactatgtcccaacctatgaagacaaggat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gagagtaagttgatggatcttttgaactccgactatgtcccaacctatgaagacaaggat 804
Query: 541 ggtgactggatgcttgtcggtgatgtaccatgggag 576
||||||||||||||||||||||||||||||||||||
Sbjct: 805 ggtgactggatgcttgtcggtgatgtaccatgggag 840
>gnl|LJGI|TC61787 homologue to UniRef100_P13089 Cluster: Auxin-induced protein AUX28;
n=1; Glycine max|Rep: Auxin-induced protein AUX28 -
Glycine max (Soybean), partial (76%)
Length = 1235
Score = 301 bits (152), Expect = 3e-81
Identities = 232/258 (89%), Gaps = 3/258 (1%)
Strand = Plus / Plus
Query: 322 agctttgtgaaagtgagcatggatggagcaccttacctccgcaaagtggacttgagcatg 381
|||||||| || |||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 504 agctttgtcaaggtgagcatggatggagcaccttaccttcgcaaagtggacttgaagatg 563
Query: 382 tacaagacttacaaagatctctctgatgccttaggcaaaatgtttagctccttcaccatt 441
||||||| ||||| ||| || |||||| |||| | ||||||||| |||||||||||||||
Sbjct: 564 tacaagagttacagagacctttctgattccttggccaaaatgttcagctccttcaccatt 623
Query: 442 ggaaattgcgagtcccaaggcattaaggatttcatgaatgagagtaagttgatggatctt 501
|| | ||||||||| ||||| || |||||||||||||||||||||||| ||||||||||
Sbjct: 624 ggcacttgcgagtcgcaagggatgaaggatttcatgaatgagagtaagctgatggatcta 683
Query: 502 ttgaa---ctccgactatgtcccaacctatgaagacaaggatggtgactggatgcttgtc 558
||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttgaacagctctgattatgtcccaacctatgaagacaaggatggtgactggatgcttgtc 743
Query: 559 ggtgatgtaccatgggag 576
|||||||| |||||||||
Sbjct: 744 ggtgatgtcccatgggag 761
Score = 91.7 bits (46), Expect = 5e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 202 cctcctgctaaggcgcaagtggtgggttggccaccagttcggtcgttccggaagaacatg 261
||||| || |||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 369 cctccagccaaggcgcaagtggtgggttggccacctgtgcggtcgttccggaagaacatg 428
Query: 262 tt 263
||
Sbjct: 429 tt 430
>gnl|LJGI|TC58188 homologue to UniRef100_A7NWZ8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (78%)
Length = 1237
Score = 165 bits (83), Expect = 4e-40
Identities = 202/241 (83%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 339 catggatggagcaccttacctccgcaaagtggacttgagcatgtacaagacttacaaaga 398
||||||||||||||||||||| ||||| |||||||||| |||||||| | ||||||||
Sbjct: 607 catggatggagcaccttaccttcgcaaggtggacttgacaatgtacaaaagctacaaaga 666
Query: 399 tctctctgatgccttaggcaaaatgtttagctccttcaccattggaaattgcgagtccca 458
|| |||||||| |||| ||||||||| |||||||||||||| || || | | | ||||
Sbjct: 667 gctgtctgatgctttagccaaaatgttcagctccttcaccatgggtaactatggggccca 726
Query: 459 aggcattaaggatttcatgaatgagagtaagttgatggatcttttgaac---tccgacta 515
||| || | || |||||||||||||| ||||||||||| ||| | ||| || || ||
Sbjct: 727 aggaatgatagacttcatgaatgagagcaagttgatggaccttcttaacagttctgagta 786
Query: 516 tgtcccaacctatgaagacaaggatggtgactggatgcttgtcggtgatgtaccatggga 575
||| |||||||||||||| |||||||||||||||||||| || || ||||| ||||||||
Sbjct: 787 tgtgccaacctatgaagataaggatggtgactggatgctcgtgggagatgtcccatggga 846
Query: 576 g 576
|
Sbjct: 847 g 847
>gnl|LJGI|TC66393 similar to UniRef100_A5H273 Cluster: IAA6; n=1; Cestrum
elegans|Rep: IAA6 - Cestrum elegans (Red cestrum),
complete
Length = 733
Score = 157 bits (79), Expect = 9e-38
Identities = 201/241 (83%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 339 catggatggagcaccttacctccgcaaagtggacttgagcatgtacaagacttacaaaga 398
||||||||||||||||||||| ||||| |||||||||| ||||| || | ||||||||
Sbjct: 195 catggatggagcaccttaccttcgcaaggtggacttgacaatgtataaaagctacaaaga 254
Query: 399 tctctctgatgccttaggcaaaatgtttagctccttcaccattggaaattgcgagtccca 458
|| |||||||| |||| ||||||||| |||||||||||||| || || | | | ||||
Sbjct: 255 gctgtctgatgctttagccaaaatgttcagctccttcaccatgggtaactatggggccca 314
Query: 459 aggcattaaggatttcatgaatgagagtaagttgatggatcttttgaac---tccgacta 515
||| || | || |||||||||||||| ||||||||||| ||| | ||| || || ||
Sbjct: 315 aggaatgatagacttcatgaatgagagcaagttgatggaccttcttaacagttctgagta 374
Query: 516 tgtcccaacctatgaagacaaggatggtgactggatgcttgtcggtgatgtaccatggga 575
||| |||||||||||||| |||||||||||||||||||| || || ||||| ||||||||
Sbjct: 375 tgtgccaacctatgaagataaggatggtgactggatgctcgtgggagatgtcccatggga 434
Query: 576 g 576
|
Sbjct: 435 g 435
>gnl|LJGI|BW597272 similar to UniRef100_Q38825 Cluster: Auxin-responsive protein IAA7;
n=3; Arabidopsis thaliana|Rep: Auxin-responsive protein
IAA7 - Arabidopsis thaliana (Mouse-ear cress), partial
(31%)
Length = 355
Score = 91.7 bits (46), Expect = 5e-18
Identities = 88/102 (86%)
Strand = Plus / Plus
Query: 339 catggatggagcaccttacctccgcaaagtggacttgagcatgtacaagacttacaaaga 398
||||||||||||||||||||| ||||| |||||||||| |||||||| | ||||||||
Sbjct: 240 catggatggagcaccttaccttcgcaaggtggacttgacaatgtacaaaagctacaaaga 299
Query: 399 tctctctgatgccttaggcaaaatgtttagctccttcaccat 440
|| ||||| || |||| ||||||||| |||||||||||||
Sbjct: 300 gctgtctgacgctttagccaaaatgttccgctccttcaccat 341
>gnl|LJGI|TC70921 similar to UniRef100_Q0PH24 Cluster: Auxin-regulated protein; n=1;
Populus tomentosa|Rep: Auxin-regulated protein - Populus
tomentosa (Chinese white poplar), partial (70%)
Length = 1030
Score = 91.7 bits (46), Expect = 5e-18
Identities = 201/252 (79%), Gaps = 3/252 (1%)
Strand = Plus / Plus
Query: 328 gtgaaagtgagcatggatggagcaccttacctccgcaaagtggacttgagcatgtacaag 387
||||| ||||||||||| || ||||||||||| ||||| |||||||||| ||||||||
Sbjct: 499 gtgaaggtgagcatggacggtgcaccttacctacgcaaggtggacttgaaattgtacaag 558
Query: 388 acttacaaagatctctctgatgccttaggcaaaatgtttagctccttcaccattggaaat 447
| ||| |||| ||||| || || | |||||||| || ||||||||| | | ||
Sbjct: 559 agctaccaagagctctcggaggcgctgtctaaaatgttcagttccttcaccgtcgccaaa 618
Query: 448 tgcgagtcccaaggcattaaggatttcatgaatgagagtaagttgatggatcttttgaa- 506
|| | ||||||||| | ||||| |||||||||||||| || ||||| |||||| ||||
Sbjct: 619 tgtggctcccaaggcgtgaaggacttcatgaatgagagcaaattgatagatcttctgaat 678
Query: 507 --ctccgactatgtcccaacctatgaagacaaggatggtgactggatgcttgtcggtgat 564
||| || ||||| || || ||||||||||| ||||| || |||||||| || ||||||
Sbjct: 679 ggctctgattatgtgccgacatatgaagacaaagatggagattggatgctagtgggtgat 738
Query: 565 gtaccatgggag 576
|| |||||||||
Sbjct: 739 gtcccatgggag 750
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 205 cctgctaaggcgcaagtggtgggttggccaccagttcggtcgttccggaagaacat 260
||||| ||||| |||||||| ||||||||||||||||| || ||| | ||||||||
Sbjct: 334 cctgcaaaggcacaagtggttggttggccaccagttcgttcattcagaaagaacat 389
>gnl|LJGI|BP049007 homologue to UniRef100_A7QVQ0 Cluster: Chromosome chr14
scaffold_190, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_190, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (37%)
Length = 496
Score = 79.8 bits (40), Expect = 2e-14
Identities = 105/126 (83%), Gaps = 3/126 (2%)
Strand = Plus / Minus
Query: 454 tcccaaggcattaaggatttcatgaatgagagtaagttgatggatcttttgaa---ctcc 510
||||||||| | ||||| |||||||||||||| || ||||| |||||| |||| |||
Sbjct: 446 tcccaaggcgtgaaggacttcatgaatgagagcaaattgatagatcttctgaatggctct 387
Query: 511 gactatgtcccaacctatgaagacaaggatggtgactggatgcttgtcggtgatgtacca 570
|| ||||| || || ||||||||||| ||||| || |||||||| || |||||||| |||
Sbjct: 386 gattatgtgccgacatatgaagacaaagatggagattggatgctagtgggtgatgtccca 327
Query: 571 tgggag 576
||||||
Sbjct: 326 tgggag 321
>gnl|LJGI|TC59414 similar to UniRef100_Q8LSK7 Cluster: Auxin-regulated protein; n=1;
Populus tremula x Populus tremuloides|Rep:
Auxin-regulated protein - Populus tremula x Populus
tremuloides, partial (73%)
Length = 1251
Score = 77.8 bits (39), Expect = 7e-14
Identities = 95/113 (84%), Gaps = 3/113 (2%)
Strand = Plus / Plus
Query: 466 aaggatttcatgaatgagagtaagttgatggatcttttgaac---tccgactatgtccca 522
||||| |||||||||||||| || ||||| || ||||||||| || || ||||| ||
Sbjct: 715 aaggacttcatgaatgagagcaaattgatagaccttttgaacggctctgattatgtgccc 774
Query: 523 acctatgaagacaaggatggtgactggatgcttgtcggtgatgtaccatggga 575
|| ||| ||||||||||||||||||||||||| |||||||||| || |||||
Sbjct: 775 acttatcaagacaaggatggtgactggatgctcctcggtgatgtgccctggga 827
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 205 cctgctaaggcgcaagtggtgggttggccaccagttcggtcgttccggaagaacat 260
||||| ||||| ||||| |||||||||||||||||||| || ||| ||||||||||
Sbjct: 409 cctgccaaggcacaagttgtgggttggccaccagttcgatccttcaggaagaacat 464
>gnl|LJGI|TC70802 similar to UniRef100_A7PEL3 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 1570
Score = 69.9 bits (35), Expect = 2e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 522 aacctatgaagacaaggatggtgactggatgcttgtcggtgatgtaccatgggag 576
|||||||||||||||||||||||| |||||||| || |||||||| || ||||||
Sbjct: 891 aacctatgaagacaaggatggtgattggatgctagttggtgatgttccctgggag 945
>gnl|LJGI|TC69855 similar to UniRef100_P32294 Cluster: Auxin-induced protein 22B; n=1;
Vigna radiata var. radiata|Rep: Auxin-induced protein 22B
- Phaseolus aureus (Mung bean) (Vigna radiata), partial
(75%)
Length = 1944
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 526 tatgaagacaaggatggtgactggatgcttgtcggtgatgtaccatgggag 576
||||||||||||||||||||||||||||| || || ||||| |||||||||
Sbjct: 1330 tatgaagacaaggatggtgactggatgctagttggagatgttccatgggag 1380
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 331 aaagtgagcatggatggagcaccttacctc 360
|||||||||||||||||||| |||||||||
Sbjct: 1171 aaagtgagcatggatggagctccttacctc 1200
>gnl|LJGI|TC64632 homologue to UniRef100_O24542 Cluster: Auxin-induced protein 22D;
n=1; Vigna radiata var. radiata|Rep: Auxin-induced
protein 22D - Phaseolus aureus (Mung bean) (Vigna
radiata), partial (83%)
Length = 1009
Score = 67.9 bits (34), Expect = 7e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 514 tatgtcccaacctatgaagacaaggatggtgactggatgcttgtcggtgatgtaccatgg 573
||||||||||| |||||||| || ||||||||||||||||| || || ||||| ||||||
Sbjct: 557 tatgtcccaacttatgaagataaagatggtgactggatgctggttggagatgttccatgg 616
Query: 574 ga 575
||
Sbjct: 617 ga 618
>gnl|LJGI|TC74334 homologue to UniRef100_O22465 Cluster: GH1 protein; n=1; Glycine
max|Rep: GH1 protein - Glycine max (Soybean), partial
(24%)
Length = 577
Score = 61.9 bits (31), Expect = 4e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 526 tatgaagacaaggatggtgactggatgcttgtcggtgatgtaccatgggag 576
|||||||| || ||||| |||||||||||||| || |||||||||||||||
Sbjct: 102 tatgaagataaagatggagactggatgcttgtaggggatgtaccatgggag 152
>gnl|LJGI|TC74104 similar to UniRef100_A9YWR0 Cluster: GH1 protein; n=1; Medicago
truncatula|Rep: GH1 protein - Medicago truncatula (Barrel
medic), partial (87%)
Length = 1651
Score = 61.9 bits (31), Expect = 4e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 526 tatgaagacaaggatggtgactggatgcttgtcggtgatgtaccatgggag 576
|||||||| || ||||| |||||||||||||| || |||||||||||||||
Sbjct: 1101 tatgaagataaagatggagactggatgcttgtaggggatgtaccatgggag 1151
>gnl|LJGI|TC75082 homologue to UniRef100_P13089 Cluster: Auxin-induced protein AUX28;
n=1; Glycine max|Rep: Auxin-induced protein AUX28 -
Glycine max (Soybean), partial (25%)
Length = 537
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 202 cctcctgctaaggcgcaagtggtgggttggccaccagttcggtcgttccggaagaacatg 261
||||| || |||||||||||||||||| || |||| || ||| ||| |||||||||||||
Sbjct: 139 cctccagccaaggcgcaagtggtgggtcggacacctgtgcggccgtaccggaagaacatg 80
Query: 262 tt 263
||
Sbjct: 79 tt 78
>gnl|LJGI|AV780093 similar to UniRef100_A8IXW6 Cluster: Indoleacetic acid-induced
protein 16; n=1; Brassica rapa|Rep: Indoleacetic
acid-induced protein 16 - Brassica campestris (Field
mustard), partial (43%)
Length = 452
Score = 56.0 bits (28), Expect = 2e-07
Identities = 102/126 (80%), Gaps = 3/126 (2%)
Strand = Plus / Minus
Query: 454 tcccaaggcattaaggatttcatgaatgagagtaagttgatggatcttttgaa---ctcc 510
||||||||| | ||||| |||||||||||||| || |||| |||||| |||| |||
Sbjct: 376 tcccaaggcgtgaaggacttcatgaatgagagcaaactgatagatcttctgaatggctct 317
Query: 511 gactatgtcccaacctatgaagacaaggatggtgactggatgcttgtcggtgatgtacca 570
|| ||||| || || ||||||||| | ||||| || |||||||| || |||||||| ||
Sbjct: 316 gattatgtgccgacatatgaagaccaagatggagattggatgctagtgggtgatgtcccc 257
Query: 571 tgggag 576
||||||
Sbjct: 256 tgggag 251