Miyakogusa Predicted Gene
- Lj0g3v0056309.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0056309.1 Non Chatacterized Hit- tr|C0JP12|C0JP12_LOTJA
Putative basic helix-loop-helix protein BHLH4 OS=Lotus,96.14,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain; SUBFAMILY
NOT NAMED,NULL; FAMILY N,NODE_31649_length_1513_cov_169.750824.path1.1
(861 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72186 homologue to UniRef100_A7PUK8 Cluster: Chromoso... 1707 0.0
gnl|LJGI|TC69418 similar to UniRef100_A7PUK8 Cluster: Chromosome... 452 e-126
gnl|LJGI|TC75859 similar to UniRef100_A7PUK8 Cluster: Chromosome... 414 e-115
gnl|LJGI|AV419431 similar to UniRef100_Q0JDQ4 Cluster: Os04g0385... 151 8e-36
gnl|LJGI|TC59454 similar to UniRef100_A7Q620 Cluster: Chromosome... 100 3e-20
gnl|LJGI|BW602663 similar to UniRef100_A7PUK8 Cluster: Chromosom... 94 2e-18
gnl|LJGI|DC595853 homologue to UniRef100_A8JHJ7 Cluster: Predict... 72 6e-12
>gnl|LJGI|TC72186 homologue to UniRef100_A7PUK8 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (70%)
Length = 1552
Score = 1707 bits (861), Expect = 0.0
Identities = 861/861 (100%)
Strand = Plus / Plus
Query: 1 atggcgaatcacccttccgacgcccccgccgccgacgacttcctcgagcaaatcctcggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 atggcgaatcacccttccgacgcccccgccgccgacgacttcctcgagcaaatcctcggc 232
Query: 61 ctcccaaacttcgcttccgccgacggaaccgacgcttcttccttgcacgctccgatgatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ctcccaaacttcgcttccgccgacggaaccgacgcttcttccttgcacgctccgatgatg 292
Query: 121 ctgcagctcaactccggcgacctcgccgccggcggagccggctttcactcgccggtttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ctgcagctcaactccggcgacctcgccgccggcggagccggctttcactcgccggtttat 352
Query: 181 cagctgggactgagcttggaccaagggaaaggaggagggttcttgaagcctgatgatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 cagctgggactgagcttggaccaagggaaaggaggagggttcttgaagcctgatgatgct 412
Query: 241 tccgggagtggtaatcgtttccgtgaagatgttgttgttggtgccagacataagaatgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tccgggagtggtaatcgtttccgtgaagatgttgttgttggtgccagacataagaatgct 472
Query: 301 tttcatgggcaacctatgcccactactgttccttctgctccacatccaccacctatgcgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tttcatgggcaacctatgcccactactgttccttctgctccacatccaccacctatgcgt 532
Query: 361 cctagagtgcgggctagaagaggacaggctacagatccacacagcatagctgaaaggctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 cctagagtgcgggctagaagaggacaggctacagatccacacagcatagctgaaaggctg 592
Query: 421 cgccgcgaaagaatagccgaaagaatcagagctctgcaagaactggttcctagtgttaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 cgccgcgaaagaatagccgaaagaatcagagctctgcaagaactggttcctagtgttaac 652
Query: 481 aagacagatagagctgtcatgctggatgaaattgtggattatgtcaagttcttaaggctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 aagacagatagagctgtcatgctggatgaaattgtggattatgtcaagttcttaaggctt 712
Query: 541 caagtgaaggttctgagcatgagtagattaggtggagctggtgcagtggcgccactggta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 caagtgaaggttctgagcatgagtagattaggtggagctggtgcagtggcgccactggta 772
Query: 601 actgacatcccattatcatcagttgaggaagaaggtggcgagggtggaaggaaccaacca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 actgacatcccattatcatcagttgaggaagaaggtggcgagggtggaaggaaccaacca 832
Query: 661 gcctgggagaagtggtcaaatgacggcacagaaaaacaggtagctaagctcatggaagaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 gcctgggagaagtggtcaaatgacggcacagaaaaacaggtagctaagctcatggaagaa 892
Query: 721 aatattggggctgccatgcagtttctccaatcaaaggcactctgcatcatgccgatctca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 aatattggggctgccatgcagtttctccaatcaaaggcactctgcatcatgccgatctca 952
Query: 781 ctagcatcagcaatataccagtcacaaccatcagaaaactctagtatagttaagcctgaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953 ctagcatcagcaatataccagtcacaaccatcagaaaactctagtatagttaagcctgaa 1012
Query: 841 acttctcctccttcatagaca 861
|||||||||||||||||||||
Sbjct: 1013 acttctcctccttcatagaca 1033
>gnl|LJGI|TC69418 similar to UniRef100_A7PUK8 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 906
Score = 452 bits (228), Expect = e-126
Identities = 462/538 (85%), Gaps = 4/538 (0%)
Strand = Plus / Plus
Query: 210 aggaggagggttcttgaagcctgatgatgcttccgggagtggtaatcgtttccgtgaaga 269
||||||||||||||||||||| || || ||||| || ||||| || ||||||||||| ||
Sbjct: 372 aggaggagggttcttgaagcccgaggacgcttctggtagtggaaagcgtttccgtgacga 431
Query: 270 tgttgttgttggtgccagacataagaatgcttttcatgggcaacctatgcccactactgt 329
|| |||| |||| |||| |||||||| || ||||||||| || ||| | ||||| |
Sbjct: 432 cgtcgttgatggt---agacctaagaatgtttatcatgggcagcccatgtctactacgat 488
Query: 330 tccttctgctccacatccaccacctatgcgtcctagagtgcgggctagaagaggacaggc 389
||| ||||||| ||||| ||| | ||||||||||| |||||||||||||||||||||||
Sbjct: 489 gcctgctgctccccatcctccagccatgcgtcctagggtgcgggctagaagaggacaggc 548
Query: 390 tacagatccacacagcatagctgaaaggctgcgccgcgaaagaatagccgaaagaatcag 449
|||||||||||||||||||||||||||| ||||| | ||||||||||| |||||||| ||
Sbjct: 549 tacagatccacacagcatagctgaaaggttgcgcagagaaagaatagcagaaagaattag 608
Query: 450 agctctgcaagaactggttcctagtgttaacaagacagatagagctgtcatgctggatga 509
|| |||||| |||||||| ||||| |||||||| |||||||| | |||| | |||||
Sbjct: 609 ggcatagcaagagctggttccaagtgtcaacaagactgatagagccgccatgttagatga 668
Query: 510 aattgtggattatgtcaagttcttaaggcttcaagtgaaggttctgagcatgagtagatt 569
||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 669 aatagtggattatgtgaagttcttaaggcttcaagtgaaggttttgagcatgagtagatt 728
Query: 570 aggtggagc-tggtgcagtggcgccactggtaactgacatcccattatcatcagttgagg 628
|| ||||| ||||||||||| |||||||||||||| ||||||||||| ||||| ||||
Sbjct: 729 gggcggagcagggtgcagtggcaccactggtaactgatatcccattatcgtcagtggagg 788
Query: 629 aagaaggtggcgagggtggaaggaaccaaccagcctgggagaagtggtcaaatgacggca 688
||||||| || || |||| || |||| ||| |||||| |||||||||| ||| || |
Sbjct: 789 aagaaggcggtgaaggtgcgagaaaccgaccgagctgggacaagtggtcaagtgatggta 848
Query: 689 cagaaaaacaggtagctaagctcatggaagaaaatattggggctgccatgcagtttct 746
|||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||
Sbjct: 849 cagaaaaacaggtagctaagcttatggaagaaaaggttggggctgccatgcaatttct 906
Score = 93.7 bits (47), Expect = 2e-18
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 11 acccttccgacgcccccgccgccgacgacttcctcgagcaaatcctcggcctccc 65
||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 acccttcggacgctcccgccgccgacgacttcctcgagcaaatcctcggcctccc 188
>gnl|LJGI|TC75859 similar to UniRef100_A7PUK8 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 911
Score = 414 bits (209), Expect = e-115
Identities = 317/353 (89%)
Strand = Plus / Plus
Query: 505 gatgaaattgtggattatgtcaagttcttaaggcttcaagtgaaggttctgagcatgagt 564
|||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 8 gatgaaatagtggattatgtgaagttcttaaggcttcaagtgaaggttttgagcatgagt 67
Query: 565 agattaggtggagctggtgcagtggcgccactggtaactgacatcccattatcatcagtt 624
||||| || ||||| ||||||||||| |||||||||||||| ||||||||||| |||||
Sbjct: 68 agattgggcggagcaggtgcagtggcaccactggtaactgatatcccattatcgtcagtg 127
Query: 625 gaggaagaaggtggcgagggtggaaggaaccaaccagcctgggagaagtggtcaaatgac 684
||||||||||| || || |||| || |||| |||||| ||||| ||||||||||||||
Sbjct: 128 gaggaagaaggcggtgaaggtgcgagaaaccgaccagcttgggacaagtggtcaaatgat 187
Query: 685 ggcacagaaaaacaggtagctaagctcatggaagaaaatattggggctgccatgcagttt 744
|| ||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||
Sbjct: 188 ggtacagaaaaacaggtagctaagcttatggaagaaaatgttggggctgccatgcaattt 247
Query: 745 ctccaatcaaaggcactctgcatcatgccgatctcactagcatcagcaatataccagtca 804
|| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 248 cttcaatcaaaggcactctgcatcatgcccatctcactggcatcagcaatataccagtca 307
Query: 805 caaccatcagaaaactctagtatagttaagcctgaaacttctcctccttcata 857
|||||| | || | ||||||||| || ||||| |||||| ||||||||||||
Sbjct: 308 caaccaccggatagctctagtatggtcaagccggaaactaatcctccttcata 360
>gnl|LJGI|AV419431 similar to UniRef100_Q0JDQ4 Cluster: Os04g0385700 protein; n=1;
Oryza sativa Japonica Group|Rep: Os04g0385700 protein -
Oryza sativa subsp. japonica (Rice), partial (10%)
Length = 276
Score = 151 bits (76), Expect = 8e-36
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 432 aatagccgaaagaatcagagctctgcaagaactggttcctagtgttaacaagacagatag 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatagccgaaagaatcagagctctgcaagaactggttcctagtgttaacaagacagatag 60
Query: 492 agctgtcatgctggat 507
||||||||||||||||
Sbjct: 61 agctgtcatgctggat 76
>gnl|LJGI|TC59454 similar to UniRef100_A7Q620 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (79%)
Length = 1699
Score = 99.6 bits (50), Expect = 3e-20
Identities = 86/98 (87%)
Strand = Plus / Plus
Query: 490 agagctgtcatgctggatgaaattgtggattatgtcaagttcttaaggcttcaagtgaag 549
||||||| ||||| |||||||||||||||||||| |||||| ||||||| || || |||
Sbjct: 950 agagctgcgatgcttgatgaaattgtggattatgtgaagttcctaaggctccaggttaag 1009
Query: 550 gttctgagcatgagtagattaggtggagctggtgcagt 587
|| |||||||||||||| | |||||||||||||||||
Sbjct: 1010 gtgttgagcatgagtagactgggtggagctggtgcagt 1047
>gnl|LJGI|BW602663 similar to UniRef100_A7PUK8 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 487
Score = 93.7 bits (47), Expect = 2e-18
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 11 acccttccgacgcccccgccgccgacgacttcctcgagcaaatcctcggcctccc 65
||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 acccttcggacgctcccgccgccgacgacttcctcgagcaaatcctcggcctccc 234
Score = 58.0 bits (29), Expect = 9e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 210 aggaggagggttcttgaagcctgatgatgcttccgggagtggtaatcgtttccgtga 266
||||||||||||||||||||| || || ||||| || ||||| || |||||||||||
Sbjct: 418 aggaggagggttcttgaagcccgaggacgcttctggtagtggaaagcgtttccgtga 474
>gnl|LJGI|DC595853 homologue to UniRef100_A8JHJ7 Cluster: Predicted protein of CLR
family; n=1; Chlamydomonas reinhardtii|Rep: Predicted
protein of, partial (0%)
Length = 548
Score = 71.9 bits (36), Expect = 6e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 263 gtgaagatgttgttgttggtgccagacataagaatg 298
||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgaagatgttgttgttggtgccagacataagaatg 36